RNA–Protein interactions for RNA: ENST00000568865.2

CNN2-209, Transcript of calponin 2, humanhuman

TSL 5

Gene CNN2, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-209ENST00000568865 NISCHQ9Y2I1 1504 aa46.36■■■■■ 5.01
CNN2-209ENST00000568865 CCDC180Q9P1Z9 1646 aa41.31■■■■■ 4.2
CNN2-209ENST00000568865 ABCC9O60706 1549 aa40.3■■■■■ 4.04
CNN2-209ENST00000568865 RB1CC1Q8TDY2 1594 aa38.8■■■■□ 3.8
CNN2-209ENST00000568865 NACADO15069 1562 aa38.73■■■■□ 3.79
CNN2-209ENST00000568865 ZCCHC6Q5VYS8 1495 aaKnown RBP38.69■■■■□ 3.78
CNN2-209ENST00000568865 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
CNN2-209ENST00000568865 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
CNN2-209ENST00000568865 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
CNN2-209ENST00000568865 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
CNN2-209ENST00000568865 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
CNN2-209ENST00000568865 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
CNN2-209ENST00000568865 PABPN1Q86U42 306 aaKnown RBP eCLIP37.57■■■■□ 3.6
CNN2-209ENST00000568865 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
CNN2-209ENST00000568865 DNAJC5BQ9UF47 199 aa36.78■■■■□ 3.48
CNN2-209ENST00000568865 EIF4G1Q04637 1599 aaKnown RBP36.64■■■■□ 3.46
CNN2-209ENST00000568865 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
CNN2-209ENST00000568865 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
CNN2-209ENST00000568865 SMARCA4P51532 1647 aa36.04■■■■□ 3.36
CNN2-209ENST00000568865 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
CNN2-209ENST00000568865 MROH2BQ7Z745 1585 aa35.76■■■■□ 3.31
CNN2-209ENST00000568865 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
CNN2-209ENST00000568865 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
CNN2-209ENST00000568865 NCAPD3P42695 1498 aa35.67■■■■□ 3.3
CNN2-209ENST00000568865 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
CNN2-209ENST00000568865 HMGXB3Q12766 1538 aa35.61■■■■□ 3.29
CNN2-209ENST00000568865 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
CNN2-209ENST00000568865 WIZO95785 1651 aa35.43■■■■□ 3.26
CNN2-209ENST00000568865 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
CNN2-209ENST00000568865 TOP2AP11388 1531 aaKnown RBP35.04■■■■□ 3.2
CNN2-209ENST00000568865 NESP48681 1621 aa34.89■■■■□ 3.18
CNN2-209ENST00000568865 LAMC3Q9Y6N6 1575 aa34.82■■■■□ 3.16
CNN2-209ENST00000568865 ERCC6Q03468 1493 aa34.74■■■■□ 3.15
CNN2-209ENST00000568865 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
CNN2-209ENST00000568865 KIF21AQ7Z4S6 1674 aa34.58■■■■□ 3.13
CNN2-209ENST00000568865 CCDC88BA6NC98 1476 aa34.54■■■■□ 3.12
CNN2-209ENST00000568865 PDS5BQ9NTI5 1447 aa34.5■■■■□ 3.11
CNN2-209ENST00000568865 CFTRP13569 1480 aa34.47■■■■□ 3.11
CNN2-209ENST00000568865 THOC2Q8NI27 1593 aaKnown RBP34.43■■■■□ 3.1
CNN2-209ENST00000568865 SUPT5HO00267 1087 aaKnown RBP34.43■■■■□ 3.1
CNN2-209ENST00000568865 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
CNN2-209ENST00000568865 CUX2O14529 1486 aa34.32■■■■□ 3.08
CNN2-209ENST00000568865 FANCD2Q9BXW9 1451 aa34.3■■■■□ 3.08
CNN2-209ENST00000568865 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
CNN2-209ENST00000568865 MRC2Q9UBG0 1479 aa34.22■■■■□ 3.07
CNN2-209ENST00000568865 WDR62O43379 1518 aa34.13■■■■□ 3.05
CNN2-209ENST00000568865 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
CNN2-209ENST00000568865 DNMBPQ6XZF7 1577 aa33.78■■■■□ 3
CNN2-209ENST00000568865 TOPBP1Q92547 1522 aa33.77■■■■□ 3
CNN2-209ENST00000568865 ABCC8Q09428 1581 aa33.71■■■□□ 2.99
CNN2-209ENST00000568865 CUX1P39880 1505 aa33.56■■■□□ 2.96
CNN2-209ENST00000568865 IFT140Q96RY7 1462 aa33.53■■■□□ 2.96
CNN2-209ENST00000568865 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
CNN2-209ENST00000568865 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
CNN2-209ENST00000568865 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
CNN2-209ENST00000568865 ZNF608Q9ULD9 1512 aaPredicted RBP33.39■■■□□ 2.94
CNN2-209ENST00000568865 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
CNN2-209ENST00000568865 RAD54L2Q9Y4B4 1467 aa33.34■■■□□ 2.93
CNN2-209ENST00000568865 BIVM-ERCC5R4GMW8 1640 aa33.33■■■□□ 2.93
CNN2-209ENST00000568865 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.93
CNN2-209ENST00000568865 SYNJ1O43426 1573 aa33.32■■■□□ 2.93
CNN2-209ENST00000568865 TOP2BQ02880 1626 aa33.3■■■□□ 2.92
CNN2-209ENST00000568865 SOGA1O94964 1423 aa33.29■■■□□ 2.92
CNN2-209ENST00000568865 WDR97A6NE52 1622 aa33.27■■■□□ 2.92
CNN2-209ENST00000568865 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.91e-6■■■■□ 19.7
CNN2-209ENST00000568865 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
CNN2-209ENST00000568865 ABCA10Q8WWZ4 1543 aa33.08■■■□□ 2.89
CNN2-209ENST00000568865 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
CNN2-209ENST00000568865 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
CNN2-209ENST00000568865 ABCA5Q8WWZ7 1642 aa33.03■■■□□ 2.88
CNN2-209ENST00000568865 CHD1O14646 1710 aa32.96■■■□□ 2.87
CNN2-209ENST00000568865 GAPVD1Q14C86 1478 aa32.95■■■□□ 2.86
CNN2-209ENST00000568865 SNAPC4Q5SXM2 1469 aa32.94■■■□□ 2.86
CNN2-209ENST00000568865 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
CNN2-209ENST00000568865 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
CNN2-209ENST00000568865 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
CNN2-209ENST00000568865 ADAMTS12P58397 1594 aa32.73■■■□□ 2.83
CNN2-209ENST00000568865 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
CNN2-209ENST00000568865 FBLN2P98095 1184 aa32.73■■■□□ 2.83
CNN2-209ENST00000568865 ERICH3Q5RHP9 1530 aa32.7■■■□□ 2.82
CNN2-209ENST00000568865 CHMP7Q8WUX9 453 aaPredicted RBP32.61■■■□□ 2.81
CNN2-209ENST00000568865 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
CNN2-209ENST00000568865 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
CNN2-209ENST00000568865 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
CNN2-209ENST00000568865 CLASP1Q7Z460 1538 aa32.52■■■□□ 2.8
CNN2-209ENST00000568865 CUL7Q14999 1698 aa32.49■■■□□ 2.79
CNN2-209ENST00000568865 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
CNN2-209ENST00000568865 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
CNN2-209ENST00000568865 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
CNN2-209ENST00000568865 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
CNN2-209ENST00000568865 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
CNN2-209ENST00000568865 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
CNN2-209ENST00000568865 IGF1RP08069 1367 aa32.39■■■□□ 2.78
CNN2-209ENST00000568865 NUP160Q12769 1436 aa32.36■■■□□ 2.77
CNN2-209ENST00000568865 RUSC2Q8N2Y8 1516 aa32.35■■■□□ 2.77
CNN2-209ENST00000568865 CARMIL1Q5VZK9 1371 aa32.23■■■□□ 2.75
CNN2-209ENST00000568865 SHROOM2Q13796 1616 aa32.19■■■□□ 2.74
CNN2-209ENST00000568865 ARAP1Q96P48 1450 aa32.15■■■□□ 2.74
CNN2-209ENST00000568865 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
CNN2-209ENST00000568865 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms