RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
NEDD4L-221ENST00000588066 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
NEDD4L-221ENST00000588066 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
NEDD4L-221ENST00000588066 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
NEDD4L-221ENST00000588066 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-221ENST00000588066 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
NEDD4L-221ENST00000588066 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
NEDD4L-221ENST00000588066 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
NEDD4L-221ENST00000588066 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
NEDD4L-221ENST00000588066 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
NEDD4L-221ENST00000588066 ABCC9O60706 1549 aa15.89■□□□□ 0.13
NEDD4L-221ENST00000588066 NACADO15069 1562 aa15.83■□□□□ 0.12
NEDD4L-221ENST00000588066 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
NEDD4L-221ENST00000588066 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
NEDD4L-221ENST00000588066 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
NEDD4L-221ENST00000588066 SUPT5HO00267 1087 aaKnown RBP15.41■□□□□ 0.06
NEDD4L-221ENST00000588066 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
NEDD4L-221ENST00000588066 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
NEDD4L-221ENST00000588066 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
NEDD4L-221ENST00000588066 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
NEDD4L-221ENST00000588066 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
NEDD4L-221ENST00000588066 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
NEDD4L-221ENST00000588066 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
NEDD4L-221ENST00000588066 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
NEDD4L-221ENST00000588066 WIZO95785 1651 aa14.88□□□□□ -0.03
NEDD4L-221ENST00000588066 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
NEDD4L-221ENST00000588066 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
NEDD4L-221ENST00000588066 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
NEDD4L-221ENST00000588066 ATAD2BQ9ULI0 1458 aa14.68□□□□□ -0.06
NEDD4L-221ENST00000588066 FOXD1Q16676 465 aa14.65□□□□□ -0.06
NEDD4L-221ENST00000588066 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
NEDD4L-221ENST00000588066 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
NEDD4L-221ENST00000588066 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
NEDD4L-221ENST00000588066 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
NEDD4L-221ENST00000588066 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
NEDD4L-221ENST00000588066 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
NEDD4L-221ENST00000588066 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
NEDD4L-221ENST00000588066 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
NEDD4L-221ENST00000588066 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
NEDD4L-221ENST00000588066 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
NEDD4L-221ENST00000588066 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
NEDD4L-221ENST00000588066 CFTRP13569 1480 aa14.26□□□□□ -0.13
NEDD4L-221ENST00000588066 EEA1Q15075 1411 aa14.24□□□□□ -0.13
NEDD4L-221ENST00000588066 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
NEDD4L-221ENST00000588066 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
NEDD4L-221ENST00000588066 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
NEDD4L-221ENST00000588066 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
NEDD4L-221ENST00000588066 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
NEDD4L-221ENST00000588066 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
NEDD4L-221ENST00000588066 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
NEDD4L-221ENST00000588066 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
NEDD4L-221ENST00000588066 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
NEDD4L-221ENST00000588066 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
NEDD4L-221ENST00000588066 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
NEDD4L-221ENST00000588066 SOGA1O94964 1423 aa14.07□□□□□ -0.16
NEDD4L-221ENST00000588066 CUX1P39880 1505 aa14.04□□□□□ -0.16
NEDD4L-221ENST00000588066 ADRA2BP18089 450 aa14.03□□□□□ -0.16
NEDD4L-221ENST00000588066 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
NEDD4L-221ENST00000588066 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
NEDD4L-221ENST00000588066 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
NEDD4L-221ENST00000588066 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
NEDD4L-221ENST00000588066 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
NEDD4L-221ENST00000588066 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
NEDD4L-221ENST00000588066 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.17
NEDD4L-221ENST00000588066 KIF21BO75037 1637 aa13.96□□□□□ -0.17
NEDD4L-221ENST00000588066 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
NEDD4L-221ENST00000588066 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
NEDD4L-221ENST00000588066 NESP48681 1621 aa13.93□□□□□ -0.18
NEDD4L-221ENST00000588066 UBTFP17480 764 aaKnown RBP13.93□□□□□ -0.18
NEDD4L-221ENST00000588066 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
NEDD4L-221ENST00000588066 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
NEDD4L-221ENST00000588066 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
NEDD4L-221ENST00000588066 CUX2O14529 1486 aa13.86□□□□□ -0.19
NEDD4L-221ENST00000588066 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
NEDD4L-221ENST00000588066 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
NEDD4L-221ENST00000588066 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
NEDD4L-221ENST00000588066 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
NEDD4L-221ENST00000588066 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
NEDD4L-221ENST00000588066 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
NEDD4L-221ENST00000588066 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
NEDD4L-221ENST00000588066 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
NEDD4L-221ENST00000588066 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
NEDD4L-221ENST00000588066 IGF1RP08069 1367 aa13.76□□□□□ -0.21
NEDD4L-221ENST00000588066 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
NEDD4L-221ENST00000588066 CLIP1P30622 1438 aa13.75□□□□□ -0.21
NEDD4L-221ENST00000588066 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
NEDD4L-221ENST00000588066 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
NEDD4L-221ENST00000588066 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
NEDD4L-221ENST00000588066 CUL7Q14999 1698 aa13.69□□□□□ -0.22
NEDD4L-221ENST00000588066 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
NEDD4L-221ENST00000588066 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
NEDD4L-221ENST00000588066 WDR62O43379 1518 aa13.66□□□□□ -0.22
NEDD4L-221ENST00000588066 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
NEDD4L-221ENST00000588066 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
NEDD4L-221ENST00000588066 VPS8Q8N3P4 1428 aa13.64□□□□□ -0.23
NEDD4L-221ENST00000588066 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
NEDD4L-221ENST00000588066 APLP2Q06481 763 aa13.64□□□□□ -0.23
NEDD4L-221ENST00000588066 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
NEDD4L-221ENST00000588066 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
NEDD4L-221ENST00000588066 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms