RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
TSC1-206ENST00000490179 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
TSC1-206ENST00000490179 ABCC9O60706 1549 aa29.89■■■□□ 2.38
TSC1-206ENST00000490179 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
TSC1-206ENST00000490179 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
TSC1-206ENST00000490179 NACADO15069 1562 aa28.98■■■□□ 2.23
TSC1-206ENST00000490179 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
TSC1-206ENST00000490179 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
TSC1-206ENST00000490179 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
TSC1-206ENST00000490179 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
TSC1-206ENST00000490179 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
TSC1-206ENST00000490179 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
TSC1-206ENST00000490179 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
TSC1-206ENST00000490179 SHROOM4Q9ULL8 1493 aa27.87■■■□□ 2.05
TSC1-206ENST00000490179 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
TSC1-206ENST00000490179 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
TSC1-206ENST00000490179 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
TSC1-206ENST00000490179 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
TSC1-206ENST00000490179 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
TSC1-206ENST00000490179 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
TSC1-206ENST00000490179 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
TSC1-206ENST00000490179 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
TSC1-206ENST00000490179 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
TSC1-206ENST00000490179 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
TSC1-206ENST00000490179 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
TSC1-206ENST00000490179 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
TSC1-206ENST00000490179 WIZO95785 1651 aa26.7■■□□□ 1.86
TSC1-206ENST00000490179 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
TSC1-206ENST00000490179 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
TSC1-206ENST00000490179 TOP2AP11388 1531 aaKnown RBP26.43■■□□□ 1.82
TSC1-206ENST00000490179 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
TSC1-206ENST00000490179 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
TSC1-206ENST00000490179 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
TSC1-206ENST00000490179 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
TSC1-206ENST00000490179 NESP48681 1621 aa25.96■■□□□ 1.75
TSC1-206ENST00000490179 CFTRP13569 1480 aa25.88■■□□□ 1.73
TSC1-206ENST00000490179 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
TSC1-206ENST00000490179 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
TSC1-206ENST00000490179 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
TSC1-206ENST00000490179 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
TSC1-206ENST00000490179 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
TSC1-206ENST00000490179 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
TSC1-206ENST00000490179 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
TSC1-206ENST00000490179 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
TSC1-206ENST00000490179 WDR62O43379 1518 aa25.39■■□□□ 1.66
TSC1-206ENST00000490179 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
TSC1-206ENST00000490179 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
TSC1-206ENST00000490179 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
TSC1-206ENST00000490179 CUX2O14529 1486 aa25.32■■□□□ 1.64
TSC1-206ENST00000490179 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
TSC1-206ENST00000490179 CUX1P39880 1505 aa25.26■■□□□ 1.63
TSC1-206ENST00000490179 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
TSC1-206ENST00000490179 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
TSC1-206ENST00000490179 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
TSC1-206ENST00000490179 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
TSC1-206ENST00000490179 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
TSC1-206ENST00000490179 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
TSC1-206ENST00000490179 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
TSC1-206ENST00000490179 SOGA1O94964 1423 aa25.03■■□□□ 1.6
TSC1-206ENST00000490179 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
TSC1-206ENST00000490179 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
TSC1-206ENST00000490179 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
TSC1-206ENST00000490179 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
TSC1-206ENST00000490179 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
TSC1-206ENST00000490179 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
TSC1-206ENST00000490179 EIF4G3O43432 1585 aaKnown RBP24.85■■□□□ 1.57
TSC1-206ENST00000490179 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
TSC1-206ENST00000490179 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
TSC1-206ENST00000490179 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.565e-6■■□□□ 14.3
TSC1-206ENST00000490179 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
TSC1-206ENST00000490179 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
TSC1-206ENST00000490179 PBRM1Q86U86 1689 aa24.71■■□□□ 1.55
TSC1-206ENST00000490179 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
TSC1-206ENST00000490179 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
TSC1-206ENST00000490179 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
TSC1-206ENST00000490179 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
TSC1-206ENST00000490179 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
TSC1-206ENST00000490179 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
TSC1-206ENST00000490179 IGF1RP08069 1367 aa24.52■■□□□ 1.52
TSC1-206ENST00000490179 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
TSC1-206ENST00000490179 FBLN2P98095 1184 aa24.49■■□□□ 1.51
TSC1-206ENST00000490179 EEA1Q15075 1411 aa24.49■■□□□ 1.51
TSC1-206ENST00000490179 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
TSC1-206ENST00000490179 CUL7Q14999 1698 aa24.49■■□□□ 1.51
TSC1-206ENST00000490179 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
TSC1-206ENST00000490179 CHD1O14646 1710 aa24.47■■□□□ 1.51
TSC1-206ENST00000490179 CHMP7Q8WUX9 453 aaPredicted RBP24.46■■□□□ 1.51
TSC1-206ENST00000490179 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
TSC1-206ENST00000490179 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
TSC1-206ENST00000490179 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
TSC1-206ENST00000490179 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
TSC1-206ENST00000490179 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
TSC1-206ENST00000490179 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
TSC1-206ENST00000490179 PRXQ9BXM0 1461 aa24.29■■□□□ 1.48
TSC1-206ENST00000490179 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
TSC1-206ENST00000490179 NUP160Q12769 1436 aa24.23■■□□□ 1.47
TSC1-206ENST00000490179 KIF21BO75037 1637 aa24.21■■□□□ 1.47
TSC1-206ENST00000490179 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
TSC1-206ENST00000490179 KIAA0586Q9BVV6 1533 aa24.11■■□□□ 1.45
TSC1-206ENST00000490179 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 1705.5 ms