RNA–Protein interactions for RNA: ENST00000566695.5

CNN2-208, Transcript of calponin 2, humanhuman

TSL 2

Gene CNN2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-208ENST00000566695 NISCHQ9Y2I1 1504 aa29.56■■■□□ 2.32
CNN2-208ENST00000566695 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
CNN2-208ENST00000566695 ABCC9O60706 1549 aa25.79■■□□□ 1.72
CNN2-208ENST00000566695 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
CNN2-208ENST00000566695 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
CNN2-208ENST00000566695 NACADO15069 1562 aa24.73■■□□□ 1.55
CNN2-208ENST00000566695 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
CNN2-208ENST00000566695 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
CNN2-208ENST00000566695 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
CNN2-208ENST00000566695 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
CNN2-208ENST00000566695 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
CNN2-208ENST00000566695 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
CNN2-208ENST00000566695 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
CNN2-208ENST00000566695 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
CNN2-208ENST00000566695 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
CNN2-208ENST00000566695 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
CNN2-208ENST00000566695 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
CNN2-208ENST00000566695 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
CNN2-208ENST00000566695 SMARCA4P51532 1647 aa23■■□□□ 1.27
CNN2-208ENST00000566695 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
CNN2-208ENST00000566695 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
CNN2-208ENST00000566695 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
CNN2-208ENST00000566695 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
CNN2-208ENST00000566695 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
CNN2-208ENST00000566695 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
CNN2-208ENST00000566695 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
CNN2-208ENST00000566695 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
CNN2-208ENST00000566695 WIZO95785 1651 aa22.61■■□□□ 1.21
CNN2-208ENST00000566695 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
CNN2-208ENST00000566695 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
CNN2-208ENST00000566695 NESP48681 1621 aa22.29■■□□□ 1.16
CNN2-208ENST00000566695 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
CNN2-208ENST00000566695 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
CNN2-208ENST00000566695 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
CNN2-208ENST00000566695 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
CNN2-208ENST00000566695 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
CNN2-208ENST00000566695 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
CNN2-208ENST00000566695 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
CNN2-208ENST00000566695 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
CNN2-208ENST00000566695 CFTRP13569 1480 aa21.99■■□□□ 1.11
CNN2-208ENST00000566695 CUX2O14529 1486 aa21.97■■□□□ 1.11
CNN2-208ENST00000566695 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
CNN2-208ENST00000566695 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
CNN2-208ENST00000566695 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
CNN2-208ENST00000566695 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
CNN2-208ENST00000566695 WDR62O43379 1518 aa21.8■■□□□ 1.08
CNN2-208ENST00000566695 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
CNN2-208ENST00000566695 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
CNN2-208ENST00000566695 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
CNN2-208ENST00000566695 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
CNN2-208ENST00000566695 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
CNN2-208ENST00000566695 CUX1P39880 1505 aa21.39■■□□□ 1.02
CNN2-208ENST00000566695 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
CNN2-208ENST00000566695 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
CNN2-208ENST00000566695 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1
CNN2-208ENST00000566695 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
CNN2-208ENST00000566695 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
CNN2-208ENST00000566695 RAD54L2Q9Y4B4 1467 aa21.29■■□□□ 1
CNN2-208ENST00000566695 SOGA1O94964 1423 aa21.29■■□□□ 1
CNN2-208ENST00000566695 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
CNN2-208ENST00000566695 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
CNN2-208ENST00000566695 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
CNN2-208ENST00000566695 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
CNN2-208ENST00000566695 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
CNN2-208ENST00000566695 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■■■□ 19.7
CNN2-208ENST00000566695 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
CNN2-208ENST00000566695 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
CNN2-208ENST00000566695 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
CNN2-208ENST00000566695 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
CNN2-208ENST00000566695 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
CNN2-208ENST00000566695 CHD1O14646 1710 aa21.07■□□□□ 0.96
CNN2-208ENST00000566695 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
CNN2-208ENST00000566695 SNAPC4Q5SXM2 1469 aa21.06■□□□□ 0.96
CNN2-208ENST00000566695 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
CNN2-208ENST00000566695 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
CNN2-208ENST00000566695 FBLN2P98095 1184 aa21.01■□□□□ 0.95
CNN2-208ENST00000566695 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
CNN2-208ENST00000566695 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
CNN2-208ENST00000566695 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CNN2-208ENST00000566695 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
CNN2-208ENST00000566695 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
CNN2-208ENST00000566695 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
CNN2-208ENST00000566695 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
CNN2-208ENST00000566695 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
CNN2-208ENST00000566695 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
CNN2-208ENST00000566695 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
CNN2-208ENST00000566695 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
CNN2-208ENST00000566695 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
CNN2-208ENST00000566695 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
CNN2-208ENST00000566695 CUL7Q14999 1698 aa20.74■□□□□ 0.91
CNN2-208ENST00000566695 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
CNN2-208ENST00000566695 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
CNN2-208ENST00000566695 IGF1RP08069 1367 aa20.66■□□□□ 0.9
CNN2-208ENST00000566695 NUP160Q12769 1436 aa20.65■□□□□ 0.9
CNN2-208ENST00000566695 RUSC2Q8N2Y8 1516 aa20.61■□□□□ 0.89
CNN2-208ENST00000566695 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
CNN2-208ENST00000566695 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
CNN2-208ENST00000566695 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
CNN2-208ENST00000566695 CYB5RLQ6IPT4 315 aa20.52■□□□□ 0.88
CNN2-208ENST00000566695 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms