Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT33AO76009 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT33AO76009 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT33AO76009 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT33AO76009 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT33AO76009 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT33AO76009 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT33AO76009 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT33AO76009 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT33AO76009 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT33AO76009 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT33AO76009 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT33AO76009 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KRT33AO76009 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
KRT33AO76009 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT33AO76009 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT33AO76009 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT33AO76009 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT33AO76009 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT33AO76009 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KRT33AO76009 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT33AO76009 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT33AO76009 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT33AO76009 MIR4281-201ENST00000580852 62 ntBASIC20.59■□□□□ 0.89
KRT33AO76009 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT33AO76009 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT33AO76009 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT33AO76009 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT33AO76009 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT33AO76009 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KRT33AO76009 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.58■□□□□ 0.89
KRT33AO76009 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KRT33AO76009 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT33AO76009 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT33AO76009 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KRT33AO76009 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT33AO76009 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT33AO76009 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT33AO76009 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT33AO76009 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT33AO76009 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
KRT33AO76009 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.57■□□□□ 0.88
KRT33AO76009 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT33AO76009 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT33AO76009 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT33AO76009 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT33AO76009 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT33AO76009 BX664725.1-201ENST00000438252 379 ntBASIC20.56■□□□□ 0.88
KRT33AO76009 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT33AO76009 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT33AO76009 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT33AO76009 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT33AO76009 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KRT33AO76009 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT33AO76009 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT33AO76009 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
KRT33AO76009 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
KRT33AO76009 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT33AO76009 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT33AO76009 AC079834.2-201ENST00000609776 1949 ntBASIC20.55■□□□□ 0.88
KRT33AO76009 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT33AO76009 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT33AO76009 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KRT33AO76009 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
KRT33AO76009 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KRT33AO76009 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT33AO76009 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT33AO76009 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRT33AO76009 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KRT33AO76009 AC009299.2-201ENST00000482477 511 ntBASIC20.53■□□□□ 0.88
KRT33AO76009 KRT125P-201ENST00000546827 989 ntBASIC20.53■□□□□ 0.88
KRT33AO76009 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms