Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC097639.1-201ENST00000565519 1891 ntBASIC19.62■□□□□ 0.73
PHF1O43189 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PHF1O43189 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.62■□□□□ 0.73
PHF1O43189 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PHF1O43189 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 KRT18P24-201ENST00000344739 1156 ntBASIC19.61■□□□□ 0.73
PHF1O43189 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.61■□□□□ 0.73
PHF1O43189 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.61■□□□□ 0.73
PHF1O43189 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHF1O43189 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF1O43189 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.6■□□□□ 0.73
PHF1O43189 AL136116.3-201ENST00000402907 1138 ntBASIC19.6■□□□□ 0.73
PHF1O43189 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.6■□□□□ 0.73
PHF1O43189 AC131281.2-201ENST00000520478 145 ntBASIC19.6■□□□□ 0.73
PHF1O43189 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.6■□□□□ 0.73
PHF1O43189 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHF1O43189 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.59■□□□□ 0.73
PHF1O43189 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF1O43189 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF1O43189 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.59■□□□□ 0.73
PHF1O43189 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF1O43189 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF1O43189 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF1O43189 FOXO3B-201ENST00000395675 1928 ntBASIC19.59■□□□□ 0.73
PHF1O43189 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHF1O43189 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF1O43189 SLC6A10P-202ENST00000431994 2058 ntBASIC19.58■□□□□ 0.73
PHF1O43189 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHF1O43189 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHF1O43189 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PHF1O43189 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PHF1O43189 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.58■□□□□ 0.72
PHF1O43189 AC005837.3-201ENST00000612163 286 ntBASIC19.58■□□□□ 0.72
PHF1O43189 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PHF1O43189 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHF1O43189 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PHF1O43189 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.58■□□□□ 0.72
PHF1O43189 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF1O43189 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PHF1O43189 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PHF1O43189 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF1O43189 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF1O43189 LINC00543-201ENST00000567234 1845 ntBASIC19.57■□□□□ 0.72
PHF1O43189 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF1O43189 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
PHF1O43189 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHF1O43189 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHF1O43189 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PHF1O43189 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PHF1O43189 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.56■□□□□ 0.72
PHF1O43189 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.56■□□□□ 0.72
PHF1O43189 AC110285.6-201ENST00000617652 491 ntBASIC19.56■□□□□ 0.72
PHF1O43189 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PHF1O43189 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHF1O43189 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 AC012676.1-201ENST00000574705 1949 ntBASIC19.55■□□□□ 0.72
PHF1O43189 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PHF1O43189 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PHF1O43189 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PHF1O43189 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHF1O43189 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHF1O43189 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PHF1O43189 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PHF1O43189 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.54■□□□□ 0.72
PHF1O43189 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.54■□□□□ 0.72
PHF1O43189 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.54■□□□□ 0.72
PHF1O43189 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.54■□□□□ 0.72
PHF1O43189 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHF1O43189 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms