Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 MTHFR-210ENST00000641407 2387 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.54□□□□□ -0.24
FREM3P0C091 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.54□□□□□ -0.24
FREM3P0C091 HLA-J-204ENST00000495278 958 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.54□□□□□ -0.24
FREM3P0C091 RNA5SP486-201ENST00000515961 83 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.54□□□□□ -0.24
FREM3P0C091 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 RN7SL48P-201ENST00000579283 293 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 AL606495.2-201ENST00000605867 535 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 AC097724.1-201ENST00000609581 426 ntBASIC13.54□□□□□ -0.24
FREM3P0C091 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
FREM3P0C091 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.54□□□□□ -0.24
FREM3P0C091 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FREM3P0C091 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FREM3P0C091 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 AP000593.2-201ENST00000542775 1433 ntBASIC13.53□□□□□ -0.24
FREM3P0C091 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
FREM3P0C091 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.53□□□□□ -0.24
FREM3P0C091 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 RPSAP36-202ENST00000494591 1261 ntBASIC13.53□□□□□ -0.24
FREM3P0C091 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 AC044849.1-201ENST00000519737 1188 ntBASIC13.53□□□□□ -0.24
FREM3P0C091 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.53□□□□□ -0.24
FREM3P0C091 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.53□□□□□ -0.24
FREM3P0C091 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.53□□□□□ -0.24
FREM3P0C091 AL139099.5-201ENST00000635274 300 ntBASIC13.53□□□□□ -0.24
FREM3P0C091 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
FREM3P0C091 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
FREM3P0C091 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FREM3P0C091 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.53□□□□□ -0.24
FREM3P0C091 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FREM3P0C091 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FREM3P0C091 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FREM3P0C091 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
FREM3P0C091 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FREM3P0C091 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FREM3P0C091 CALR4P-201ENST00000431943 946 ntBASIC13.52□□□□□ -0.24
FREM3P0C091 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.52□□□□□ -0.24
FREM3P0C091 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
FREM3P0C091 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FREM3P0C091 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FREM3P0C091 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.52□□□□□ -0.24
FREM3P0C091 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FREM3P0C091 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms