RNA–Protein interactions for RNA: ENST00000579283.2

RN7SL48P-201, Transcript of RNA, 7SL, cytoplasmic 48, pseudogene, humanhuman

BASIC

Gene RN7SL48P, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL48P-201ENST00000579283 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
RN7SL48P-201ENST00000579283 AEBP2Q6ZN18 517 aaPredicted RBP35.02■■■■□ 3.2
RN7SL48P-201ENST00000579283 CHIC1Q5VXU3 224 aa33.64■■■□□ 2.98
RN7SL48P-201ENST00000579283 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
RN7SL48P-201ENST00000579283 ABCC9O60706 1549 aa31.38■■■□□ 2.61
RN7SL48P-201ENST00000579283 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
RN7SL48P-201ENST00000579283 NACADO15069 1562 aa30.39■■■□□ 2.46
RN7SL48P-201ENST00000579283 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
RN7SL48P-201ENST00000579283 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
RN7SL48P-201ENST00000579283 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
RN7SL48P-201ENST00000579283 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
RN7SL48P-201ENST00000579283 SENP3Q9H4L4 574 aaPredicted RBP29.76■■■□□ 2.35
RN7SL48P-201ENST00000579283 PHF23Q9BUL5 403 aaPredicted RBP29.55■■■□□ 2.32
RN7SL48P-201ENST00000579283 UNC13AQ9UPW8 1703 aa29.47■■■□□ 2.31
RN7SL48P-201ENST00000579283 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
RN7SL48P-201ENST00000579283 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
RN7SL48P-201ENST00000579283 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
RN7SL48P-201ENST00000579283 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
RN7SL48P-201ENST00000579283 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
RN7SL48P-201ENST00000579283 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
RN7SL48P-201ENST00000579283 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
RN7SL48P-201ENST00000579283 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
RN7SL48P-201ENST00000579283 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
RN7SL48P-201ENST00000579283 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
RN7SL48P-201ENST00000579283 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
RN7SL48P-201ENST00000579283 SMARCA2P51531 1590 aa28.05■■■□□ 2.08
RN7SL48P-201ENST00000579283 ATAD2BQ9ULI0 1458 aa28.05■■■□□ 2.08
RN7SL48P-201ENST00000579283 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
RN7SL48P-201ENST00000579283 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
RN7SL48P-201ENST00000579283 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
RN7SL48P-201ENST00000579283 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
RN7SL48P-201ENST00000579283 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.04
RN7SL48P-201ENST00000579283 FOXD1Q16676 465 aa27.71■■■□□ 2.03
RN7SL48P-201ENST00000579283 WIZO95785 1651 aa27.67■■■□□ 2.02
RN7SL48P-201ENST00000579283 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
RN7SL48P-201ENST00000579283 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
RN7SL48P-201ENST00000579283 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
RN7SL48P-201ENST00000579283 NESP48681 1621 aa27.19■■□□□ 1.94
RN7SL48P-201ENST00000579283 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
RN7SL48P-201ENST00000579283 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
RN7SL48P-201ENST00000579283 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
RN7SL48P-201ENST00000579283 CFTRP13569 1480 aa27.11■■□□□ 1.93
RN7SL48P-201ENST00000579283 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
RN7SL48P-201ENST00000579283 PLPPR3Q6T4P5 718 aa27.04■■□□□ 1.92
RN7SL48P-201ENST00000579283 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
RN7SL48P-201ENST00000579283 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
RN7SL48P-201ENST00000579283 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
RN7SL48P-201ENST00000579283 CUX2O14529 1486 aa26.81■■□□□ 1.88
RN7SL48P-201ENST00000579283 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
RN7SL48P-201ENST00000579283 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
RN7SL48P-201ENST00000579283 PRDM2Q13029 1718 aa26.76■■□□□ 1.88
RN7SL48P-201ENST00000579283 WDR62O43379 1518 aa26.68■■□□□ 1.86
RN7SL48P-201ENST00000579283 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
RN7SL48P-201ENST00000579283 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
RN7SL48P-201ENST00000579283 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
RN7SL48P-201ENST00000579283 DNMBPQ6XZF7 1577 aa26.45■■□□□ 1.82
RN7SL48P-201ENST00000579283 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
RN7SL48P-201ENST00000579283 CUX1P39880 1505 aa26.29■■□□□ 1.8
RN7SL48P-201ENST00000579283 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
RN7SL48P-201ENST00000579283 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
RN7SL48P-201ENST00000579283 PPP6R1Q9UPN7 881 aa26.24■■□□□ 1.79
RN7SL48P-201ENST00000579283 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
RN7SL48P-201ENST00000579283 SOGA1O94964 1423 aa26.16■■□□□ 1.78
RN7SL48P-201ENST00000579283 ADRA2BP18089 450 aa26.15■■□□□ 1.78
RN7SL48P-201ENST00000579283 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
RN7SL48P-201ENST00000579283 TARBP1Q13395 1621 aaKnown RBP26.13■■□□□ 1.77
RN7SL48P-201ENST00000579283 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
RN7SL48P-201ENST00000579283 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
RN7SL48P-201ENST00000579283 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
RN7SL48P-201ENST00000579283 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
RN7SL48P-201ENST00000579283 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
RN7SL48P-201ENST00000579283 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
RN7SL48P-201ENST00000579283 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
RN7SL48P-201ENST00000579283 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.75
RN7SL48P-201ENST00000579283 PIAS4Q8N2W9 510 aaPredicted RBP25.96■■□□□ 1.75
RN7SL48P-201ENST00000579283 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
RN7SL48P-201ENST00000579283 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
RN7SL48P-201ENST00000579283 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
RN7SL48P-201ENST00000579283 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
RN7SL48P-201ENST00000579283 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
RN7SL48P-201ENST00000579283 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
RN7SL48P-201ENST00000579283 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
RN7SL48P-201ENST00000579283 MSH5O43196 834 aa25.75■■□□□ 1.71
RN7SL48P-201ENST00000579283 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
RN7SL48P-201ENST00000579283 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
RN7SL48P-201ENST00000579283 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
RN7SL48P-201ENST00000579283 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
RN7SL48P-201ENST00000579283 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
RN7SL48P-201ENST00000579283 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
RN7SL48P-201ENST00000579283 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
RN7SL48P-201ENST00000579283 FBLN2P98095 1184 aa25.61■■□□□ 1.69
RN7SL48P-201ENST00000579283 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
RN7SL48P-201ENST00000579283 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
RN7SL48P-201ENST00000579283 IGF1RP08069 1367 aa25.56■■□□□ 1.68
RN7SL48P-201ENST00000579283 CHD1O14646 1710 aa25.54■■□□□ 1.68
RN7SL48P-201ENST00000579283 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
RN7SL48P-201ENST00000579283 CUL7Q14999 1698 aa25.45■■□□□ 1.67
RN7SL48P-201ENST00000579283 CARMIL1Q5VZK9 1371 aa25.42■■□□□ 1.66
RN7SL48P-201ENST00000579283 NUP160Q12769 1436 aa25.41■■□□□ 1.66
RN7SL48P-201ENST00000579283 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms