RNA–Protein interactions for RNA: ENST00000393759.6

CD8B-204, Transcript of CD8b molecule, humanhuman

TSL 1 (best) BASIC

Gene CD8B, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD8B-204ENST00000393759 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
CD8B-204ENST00000393759 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
CD8B-204ENST00000393759 ABCC9O60706 1549 aa31.28■■■□□ 2.6
CD8B-204ENST00000393759 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
CD8B-204ENST00000393759 NACADO15069 1562 aa30.02■■■□□ 2.4
CD8B-204ENST00000393759 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
CD8B-204ENST00000393759 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
CD8B-204ENST00000393759 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
CD8B-204ENST00000393759 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
CD8B-204ENST00000393759 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
CD8B-204ENST00000393759 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
CD8B-204ENST00000393759 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
CD8B-204ENST00000393759 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.25
CD8B-204ENST00000393759 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
CD8B-204ENST00000393759 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
CD8B-204ENST00000393759 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
CD8B-204ENST00000393759 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
CD8B-204ENST00000393759 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
CD8B-204ENST00000393759 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
CD8B-204ENST00000393759 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
CD8B-204ENST00000393759 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
CD8B-204ENST00000393759 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
CD8B-204ENST00000393759 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
CD8B-204ENST00000393759 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
CD8B-204ENST00000393759 HMGXB3Q12766 1538 aa27.6■■■□□ 2.01
CD8B-204ENST00000393759 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
CD8B-204ENST00000393759 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■■□□ 2
CD8B-204ENST00000393759 WIZO95785 1651 aa27.43■■□□□ 1.98
CD8B-204ENST00000393759 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
CD8B-204ENST00000393759 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
CD8B-204ENST00000393759 NESP48681 1621 aa27.06■■□□□ 1.92
CD8B-204ENST00000393759 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
CD8B-204ENST00000393759 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
CD8B-204ENST00000393759 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
CD8B-204ENST00000393759 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
CD8B-204ENST00000393759 PDS5BQ9NTI5 1447 aa26.74■■□□□ 1.87
CD8B-204ENST00000393759 THOC2Q8NI27 1593 aaKnown RBP26.74■■□□□ 1.87
CD8B-204ENST00000393759 CCDC88BA6NC98 1476 aa26.73■■□□□ 1.87
CD8B-204ENST00000393759 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
CD8B-204ENST00000393759 CFTRP13569 1480 aa26.69■■□□□ 1.86
CD8B-204ENST00000393759 CUX2O14529 1486 aa26.66■■□□□ 1.86
CD8B-204ENST00000393759 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
CD8B-204ENST00000393759 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
CD8B-204ENST00000393759 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
CD8B-204ENST00000393759 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
CD8B-204ENST00000393759 WDR62O43379 1518 aa26.48■■□□□ 1.83
CD8B-204ENST00000393759 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
CD8B-204ENST00000393759 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
CD8B-204ENST00000393759 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
CD8B-204ENST00000393759 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
CD8B-204ENST00000393759 CUX1P39880 1505 aa25.98■■□□□ 1.75
CD8B-204ENST00000393759 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
CD8B-204ENST00000393759 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
CD8B-204ENST00000393759 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
CD8B-204ENST00000393759 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
CD8B-204ENST00000393759 ZNF608Q9ULD9 1512 aaPredicted RBP25.89■■□□□ 1.74
CD8B-204ENST00000393759 EIF4G3O43432 1585 aaKnown RBP25.89■■□□□ 1.73
CD8B-204ENST00000393759 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
CD8B-204ENST00000393759 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
CD8B-204ENST00000393759 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
CD8B-204ENST00000393759 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
CD8B-204ENST00000393759 SOGA1O94964 1423 aa25.77■■□□□ 1.72
CD8B-204ENST00000393759 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
CD8B-204ENST00000393759 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
CD8B-204ENST00000393759 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
CD8B-204ENST00000393759 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.7
CD8B-204ENST00000393759 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
CD8B-204ENST00000393759 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
CD8B-204ENST00000393759 ABCA10Q8WWZ4 1543 aa25.62■■□□□ 1.69
CD8B-204ENST00000393759 CHD1O14646 1710 aa25.6■■□□□ 1.69
CD8B-204ENST00000393759 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
CD8B-204ENST00000393759 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
CD8B-204ENST00000393759 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
CD8B-204ENST00000393759 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
CD8B-204ENST00000393759 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
CD8B-204ENST00000393759 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
CD8B-204ENST00000393759 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
CD8B-204ENST00000393759 FBLN2P98095 1184 aa25.37■■□□□ 1.65
CD8B-204ENST00000393759 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
CD8B-204ENST00000393759 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
CD8B-204ENST00000393759 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
CD8B-204ENST00000393759 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
CD8B-204ENST00000393759 RIMBP3CA6NJZ7 1639 aa25.22■■□□□ 1.63
CD8B-204ENST00000393759 RIMBP3BA6NNM3 1639 aa25.22■■□□□ 1.63
CD8B-204ENST00000393759 RIMBP3Q9UFD9 1639 aa25.22■■□□□ 1.63
CD8B-204ENST00000393759 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
CD8B-204ENST00000393759 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
CD8B-204ENST00000393759 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
CD8B-204ENST00000393759 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
CD8B-204ENST00000393759 CUL7Q14999 1698 aa25.16■■□□□ 1.62
CD8B-204ENST00000393759 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
CD8B-204ENST00000393759 NUP160Q12769 1436 aa25.08■■□□□ 1.61
CD8B-204ENST00000393759 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
CD8B-204ENST00000393759 IGF1RP08069 1367 aa25.04■■□□□ 1.6
CD8B-204ENST00000393759 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
CD8B-204ENST00000393759 ARAP1Q96P48 1450 aa24.97■■□□□ 1.59
CD8B-204ENST00000393759 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
CD8B-204ENST00000393759 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
CD8B-204ENST00000393759 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
CD8B-204ENST00000393759 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms