RNA–Protein interactions for RNA: ENST00000552244.5

RNF41-210, Transcript of ring finger protein 41, humanhuman

TSL 3 BASIC

Gene RNF41, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-210ENST00000552244 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
RNF41-210ENST00000552244 CCDC180Q9P1Z9 1646 aa32.17■■■□□ 2.74
RNF41-210ENST00000552244 ABCC9O60706 1549 aa31.74■■■□□ 2.67
RNF41-210ENST00000552244 DCAF8L2P0C7V8 631 aa30.43■■■□□ 2.46
RNF41-210ENST00000552244 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
RNF41-210ENST00000552244 NACADO15069 1562 aa30.28■■■□□ 2.44
RNF41-210ENST00000552244 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
RNF41-210ENST00000552244 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
RNF41-210ENST00000552244 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
RNF41-210ENST00000552244 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
RNF41-210ENST00000552244 PABPN1Q86U42 306 aaKnown RBP eCLIP29.69■■■□□ 2.34
RNF41-210ENST00000552244 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
RNF41-210ENST00000552244 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
RNF41-210ENST00000552244 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
RNF41-210ENST00000552244 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
RNF41-210ENST00000552244 EIF4G1Q04637 1599 aaKnown RBP28.73■■■□□ 2.19
RNF41-210ENST00000552244 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
RNF41-210ENST00000552244 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
RNF41-210ENST00000552244 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
RNF41-210ENST00000552244 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
RNF41-210ENST00000552244 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
RNF41-210ENST00000552244 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
RNF41-210ENST00000552244 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
RNF41-210ENST00000552244 SMARCA2P51531 1590 aa27.91■■■□□ 2.06
RNF41-210ENST00000552244 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
RNF41-210ENST00000552244 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
RNF41-210ENST00000552244 BAZ1BQ9UIG0 1483 aaKnown RBP27.77■■■□□ 2.04
RNF41-210ENST00000552244 WIZO95785 1651 aa27.68■■■□□ 2.02
RNF41-210ENST00000552244 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
RNF41-210ENST00000552244 NESP48681 1621 aa27.46■■□□□ 1.99
RNF41-210ENST00000552244 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
RNF41-210ENST00000552244 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
RNF41-210ENST00000552244 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
RNF41-210ENST00000552244 CADPSQ9ULU8 1353 aa27.19■■□□□ 1.94
RNF41-210ENST00000552244 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
RNF41-210ENST00000552244 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
RNF41-210ENST00000552244 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
RNF41-210ENST00000552244 CFTRP13569 1480 aa27■■□□□ 1.91
RNF41-210ENST00000552244 CUX2O14529 1486 aa26.99■■□□□ 1.91
RNF41-210ENST00000552244 THOC2Q8NI27 1593 aaKnown RBP26.98■■□□□ 1.91
RNF41-210ENST00000552244 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
RNF41-210ENST00000552244 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
RNF41-210ENST00000552244 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
RNF41-210ENST00000552244 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
RNF41-210ENST00000552244 WDR62O43379 1518 aa26.74■■□□□ 1.87
RNF41-210ENST00000552244 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
RNF41-210ENST00000552244 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
RNF41-210ENST00000552244 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
RNF41-210ENST00000552244 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
RNF41-210ENST00000552244 DNAJC5Q9H3Z4 198 aa26.34■■□□□ 1.81
RNF41-210ENST00000552244 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
RNF41-210ENST00000552244 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
RNF41-210ENST00000552244 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
RNF41-210ENST00000552244 CUX1P39880 1505 aa26.25■■□□□ 1.79
RNF41-210ENST00000552244 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
RNF41-210ENST00000552244 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
RNF41-210ENST00000552244 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
RNF41-210ENST00000552244 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
RNF41-210ENST00000552244 SOGA1O94964 1423 aa26.12■■□□□ 1.77
RNF41-210ENST00000552244 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.77
RNF41-210ENST00000552244 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
RNF41-210ENST00000552244 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
RNF41-210ENST00000552244 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
RNF41-210ENST00000552244 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
RNF41-210ENST00000552244 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
RNF41-210ENST00000552244 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
RNF41-210ENST00000552244 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
RNF41-210ENST00000552244 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
RNF41-210ENST00000552244 ABCA10Q8WWZ4 1543 aa25.86■■□□□ 1.73
RNF41-210ENST00000552244 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
RNF41-210ENST00000552244 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
RNF41-210ENST00000552244 FBLN2P98095 1184 aa25.8■■□□□ 1.72
RNF41-210ENST00000552244 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
RNF41-210ENST00000552244 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
RNF41-210ENST00000552244 CHD1O14646 1710 aa25.77■■□□□ 1.72
RNF41-210ENST00000552244 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
RNF41-210ENST00000552244 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
RNF41-210ENST00000552244 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
RNF41-210ENST00000552244 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
RNF41-210ENST00000552244 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
RNF41-210ENST00000552244 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
RNF41-210ENST00000552244 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
RNF41-210ENST00000552244 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
RNF41-210ENST00000552244 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
RNF41-210ENST00000552244 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
RNF41-210ENST00000552244 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
RNF41-210ENST00000552244 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
RNF41-210ENST00000552244 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
RNF41-210ENST00000552244 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
RNF41-210ENST00000552244 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
RNF41-210ENST00000552244 IGF1RP08069 1367 aa25.42■■□□□ 1.66
RNF41-210ENST00000552244 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
RNF41-210ENST00000552244 NUP160Q12769 1436 aa25.37■■□□□ 1.65
RNF41-210ENST00000552244 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
RNF41-210ENST00000552244 CYB5RLQ6IPT4 315 aa25.32■■□□□ 1.64
RNF41-210ENST00000552244 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
RNF41-210ENST00000552244 CUL7Q14999 1698 aa25.26■■□□□ 1.63
RNF41-210ENST00000552244 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
RNF41-210ENST00000552244 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
RNF41-210ENST00000552244 SHROOM2Q13796 1616 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms