Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.24□□□□□ -0.13
CHRNB3Q05901 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 KRT8P22-201ENST00000562317 1415 ntBASIC14.24□□□□□ -0.13
CHRNB3Q05901 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHRNB3Q05901 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 RNA5SP421-201ENST00000516864 134 ntBASIC14.23□□□□□ -0.13
CHRNB3Q05901 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 AC018529.1-201ENST00000613063 361 ntBASIC14.23□□□□□ -0.13
CHRNB3Q05901 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 Z92544.3-201ENST00000624747 417 ntBASIC14.23□□□□□ -0.13
CHRNB3Q05901 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CHRNB3Q05901 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRNB3Q05901 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AC069262.1-201ENST00000539058 672 ntBASIC14.22□□□□□ -0.13
CHRNB3Q05901 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SAMD11P1-201ENST00000571429 661 ntBASIC14.22□□□□□ -0.13
CHRNB3Q05901 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms