RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.26
CLCN6-201ENST00000312413 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
CLCN6-201ENST00000312413 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
CLCN6-201ENST00000312413 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
CLCN6-201ENST00000312413 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
CLCN6-201ENST00000312413 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
CLCN6-201ENST00000312413 APLP2Q06481 763 aa21.27■■□□□ 1
CLCN6-201ENST00000312413 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
CLCN6-201ENST00000312413 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
CLCN6-201ENST00000312413 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
CLCN6-201ENST00000312413 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
CLCN6-201ENST00000312413 MYT1Q01538 1121 aa21.05■□□□□ 0.96
CLCN6-201ENST00000312413 ZEB1P37275 1124 aaPredicted RBP20.98■□□□□ 0.95
CLCN6-201ENST00000312413 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
CLCN6-201ENST00000312413 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
CLCN6-201ENST00000312413 NEFLP07196 543 aa20.67■□□□□ 0.9
CLCN6-201ENST00000312413 YTHDC1Q96MU7 727 aaKnown RBP20.55■□□□□ 0.88
CLCN6-201ENST00000312413 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CLCN6-201ENST00000312413 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
CLCN6-201ENST00000312413 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
CLCN6-201ENST00000312413 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
CLCN6-201ENST00000312413 HRCP23327 699 aa20.16■□□□□ 0.82
CLCN6-201ENST00000312413 TRIM26Q12899 539 aaPredicted RBP20.15■□□□□ 0.82
CLCN6-201ENST00000312413 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.81
CLCN6-201ENST00000312413 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
CLCN6-201ENST00000312413 RTL5Q5HYW3 569 aaPredicted RBP19.81■□□□□ 0.76
CLCN6-201ENST00000312413 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
CLCN6-201ENST00000312413 ITGAEP38570 1179 aa19.72■□□□□ 0.75
CLCN6-201ENST00000312413 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
CLCN6-201ENST00000312413 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
CLCN6-201ENST00000312413 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
CLCN6-201ENST00000312413 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
CLCN6-201ENST00000312413 CNGB1Q14028 1251 aaPredicted RBP19.58■□□□□ 0.72
CLCN6-201ENST00000312413 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
CLCN6-201ENST00000312413 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
CLCN6-201ENST00000312413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
CLCN6-201ENST00000312413 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
CLCN6-201ENST00000312413 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
CLCN6-201ENST00000312413 BCANQ96GW7 911 aa19.36■□□□□ 0.69
CLCN6-201ENST00000312413 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
CLCN6-201ENST00000312413 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
CLCN6-201ENST00000312413 ANP32CO43423 234 aa19.19■□□□□ 0.66
CLCN6-201ENST00000312413 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
CLCN6-201ENST00000312413 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
CLCN6-201ENST00000312413 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
CLCN6-201ENST00000312413 TRIM52Q96A61 297 aa19.08■□□□□ 0.65
CLCN6-201ENST00000312413 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
CLCN6-201ENST00000312413 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
CLCN6-201ENST00000312413 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
CLCN6-201ENST00000312413 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
CLCN6-201ENST00000312413 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
CLCN6-201ENST00000312413 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
CLCN6-201ENST00000312413 ANP32BQ92688 251 aaKnown RBP18.8■□□□□ 0.6
CLCN6-201ENST00000312413 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
CLCN6-201ENST00000312413 GLIPR1L2Q4G1C9 344 aa18.79■□□□□ 0.6
CLCN6-201ENST00000312413 FKBP8Q14318 412 aa18.78■□□□□ 0.6
CLCN6-201ENST00000312413 NEFMP07197 916 aa18.72■□□□□ 0.59
CLCN6-201ENST00000312413 SLC24A1O60721 1099 aa18.64■□□□□ 0.58
CLCN6-201ENST00000312413 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.58
CLCN6-201ENST00000312413 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
CLCN6-201ENST00000312413 ABCC9O60706 1549 aa18.62■□□□□ 0.57
CLCN6-201ENST00000312413 HNRNPUQ00839 825 aaKnown RBP eCLIP18.6■□□□□ 0.57
CLCN6-201ENST00000312413 NBR1Q14596 966 aa18.57■□□□□ 0.56
CLCN6-201ENST00000312413 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
CLCN6-201ENST00000312413 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
CLCN6-201ENST00000312413 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
CLCN6-201ENST00000312413 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
CLCN6-201ENST00000312413 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.54
CLCN6-201ENST00000312413 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
CLCN6-201ENST00000312413 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
CLCN6-201ENST00000312413 ARXQ96QS3 562 aa18.4■□□□□ 0.54
CLCN6-201ENST00000312413 P3H3Q8IVL6 736 aa18.39■□□□□ 0.54
CLCN6-201ENST00000312413 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
CLCN6-201ENST00000312413 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
CLCN6-201ENST00000312413 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-201ENST00000312413 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
CLCN6-201ENST00000312413 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
CLCN6-201ENST00000312413 FBLN2P98095 1184 aa18.31■□□□□ 0.52
CLCN6-201ENST00000312413 MRS2Q9HD23 443 aa18.28■□□□□ 0.52
CLCN6-201ENST00000312413 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLCN6-201ENST00000312413 MIER1Q8N108 512 aa18.28■□□□□ 0.52
CLCN6-201ENST00000312413 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
CLCN6-201ENST00000312413 ANP32EQ9BTT0 268 aa18.24■□□□□ 0.51
CLCN6-201ENST00000312413 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
CLCN6-201ENST00000312413 DDRGK1Q96HY6 314 aa18.23■□□□□ 0.51
CLCN6-201ENST00000312413 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLCN6-201ENST00000312413 TRIM44Q96DX7 344 aaPredicted RBP18.22■□□□□ 0.51
CLCN6-201ENST00000312413 BECN1Q14457 450 aa18.19■□□□□ 0.5
CLCN6-201ENST00000312413 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
CLCN6-201ENST00000312413 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
CLCN6-201ENST00000312413 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
CLCN6-201ENST00000312413 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
CLCN6-201ENST00000312413 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
CLCN6-201ENST00000312413 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
CLCN6-201ENST00000312413 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
CLCN6-201ENST00000312413 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
CLCN6-201ENST00000312413 CHIC2Q9UKJ5 165 aa18.04■□□□□ 0.48
CLCN6-201ENST00000312413 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
CLCN6-201ENST00000312413 EIF4G2P78344 907 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLCN6-201ENST00000312413 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms