RNA–Protein interactions for RNA: ENST00000378113.6

C12orf42-201, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS P2 TSL 5 BASIC

Gene C12orf42, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-201ENST00000378113 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
C12orf42-201ENST00000378113 ABCC9O60706 1549 aa37.34■■■■□ 3.57
C12orf42-201ENST00000378113 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
C12orf42-201ENST00000378113 RB1CC1Q8TDY2 1594 aa35.43■■■■□ 3.26
C12orf42-201ENST00000378113 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.23
C12orf42-201ENST00000378113 NACADO15069 1562 aa35.15■■■■□ 3.22
C12orf42-201ENST00000378113 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
C12orf42-201ENST00000378113 PABPN1Q86U42 306 aaKnown RBP eCLIP34.73■■■■□ 3.15
C12orf42-201ENST00000378113 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
C12orf42-201ENST00000378113 MYO15BQ96JP2 1530 aa34.64■■■■□ 3.14
C12orf42-201ENST00000378113 BICRAQ9NZM4 1560 aa34.51■■■■□ 3.12
C12orf42-201ENST00000378113 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
C12orf42-201ENST00000378113 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
C12orf42-201ENST00000378113 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
C12orf42-201ENST00000378113 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
C12orf42-201ENST00000378113 CC2D2AQ9P2K1 1620 aa33.74■■■□□ 2.99
C12orf42-201ENST00000378113 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
C12orf42-201ENST00000378113 EIF4G1Q04637 1599 aaKnown RBP33.62■■■□□ 2.97
C12orf42-201ENST00000378113 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
C12orf42-201ENST00000378113 DNAJC5Q9H3Z4 198 aa32.43■■■□□ 2.78
C12orf42-201ENST00000378113 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
C12orf42-201ENST00000378113 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
C12orf42-201ENST00000378113 CUX2O14529 1486 aa32.23■■■□□ 2.75
C12orf42-201ENST00000378113 HMGXB3Q12766 1538 aa32.22■■■□□ 2.75
C12orf42-201ENST00000378113 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
C12orf42-201ENST00000378113 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
C12orf42-201ENST00000378113 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.73
C12orf42-201ENST00000378113 NESP48681 1621 aa32.06■■■□□ 2.72
C12orf42-201ENST00000378113 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
C12orf42-201ENST00000378113 PEG3Q9GZU2 1588 aa32■■■□□ 2.71
C12orf42-201ENST00000378113 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
C12orf42-201ENST00000378113 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
C12orf42-201ENST00000378113 LAMC3Q9Y6N6 1575 aa31.76■■■□□ 2.68
C12orf42-201ENST00000378113 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
C12orf42-201ENST00000378113 PDS5BQ9NTI5 1447 aa31.55■■■□□ 2.64
C12orf42-201ENST00000378113 WIZO95785 1651 aa31.49■■■□□ 2.63
C12orf42-201ENST00000378113 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
C12orf42-201ENST00000378113 MRC2Q9UBG0 1479 aa31.32■■■□□ 2.6
C12orf42-201ENST00000378113 WDR62O43379 1518 aa31.28■■■□□ 2.6
C12orf42-201ENST00000378113 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
C12orf42-201ENST00000378113 RSF1Q96T23 1441 aaPredicted RBP31.14■■■□□ 2.58
C12orf42-201ENST00000378113 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
C12orf42-201ENST00000378113 CFTRP13569 1480 aa31.1■■■□□ 2.57
C12orf42-201ENST00000378113 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
C12orf42-201ENST00000378113 URB2Q14146 1524 aaKnown RBP30.91■■■□□ 2.54
C12orf42-201ENST00000378113 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
C12orf42-201ENST00000378113 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
C12orf42-201ENST00000378113 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
C12orf42-201ENST00000378113 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
C12orf42-201ENST00000378113 ZNF608Q9ULD9 1512 aaPredicted RBP30.56■■■□□ 2.48
C12orf42-201ENST00000378113 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
C12orf42-201ENST00000378113 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
C12orf42-201ENST00000378113 RIMBP3CA6NJZ7 1639 aa30.39■■■□□ 2.46
C12orf42-201ENST00000378113 RIMBP3BA6NNM3 1639 aa30.39■■■□□ 2.46
C12orf42-201ENST00000378113 RIMBP3Q9UFD9 1639 aa30.39■■■□□ 2.46
C12orf42-201ENST00000378113 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
C12orf42-201ENST00000378113 DNMBPQ6XZF7 1577 aa30.38■■■□□ 2.45
C12orf42-201ENST00000378113 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
C12orf42-201ENST00000378113 TARBP1Q13395 1621 aaKnown RBP30.3■■■□□ 2.44
C12orf42-201ENST00000378113 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
C12orf42-201ENST00000378113 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.43
C12orf42-201ENST00000378113 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
C12orf42-201ENST00000378113 CHD1O14646 1710 aa30.18■■■□□ 2.42
C12orf42-201ENST00000378113 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
C12orf42-201ENST00000378113 SOGA1O94964 1423 aa30.03■■■□□ 2.4
C12orf42-201ENST00000378113 CYB5RLQ6IPT4 315 aa30.01■■■□□ 2.4
C12orf42-201ENST00000378113 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
C12orf42-201ENST00000378113 FBLN2P98095 1184 aa30■■■□□ 2.39
C12orf42-201ENST00000378113 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
C12orf42-201ENST00000378113 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
C12orf42-201ENST00000378113 CUX1P39880 1505 aa29.95■■■□□ 2.39
C12orf42-201ENST00000378113 WDR97A6NE52 1622 aa29.91■■■□□ 2.38
C12orf42-201ENST00000378113 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
C12orf42-201ENST00000378113 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
C12orf42-201ENST00000378113 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
C12orf42-201ENST00000378113 GRIN2BQ13224 1484 aa29.79■■■□□ 2.36
C12orf42-201ENST00000378113 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
C12orf42-201ENST00000378113 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
C12orf42-201ENST00000378113 SYNJ2O15056 1496 aa29.72■■■□□ 2.35
C12orf42-201ENST00000378113 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
C12orf42-201ENST00000378113 TRHP20396 242 aaPredicted RBP29.69■■■□□ 2.34
C12orf42-201ENST00000378113 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
C12orf42-201ENST00000378113 ABCA10Q8WWZ4 1543 aa29.63■■■□□ 2.33
C12orf42-201ENST00000378113 ABCA5Q8WWZ7 1642 aa29.62■■■□□ 2.33
C12orf42-201ENST00000378113 SUPT5HO00267 1087 aaKnown RBP29.55■■■□□ 2.32
C12orf42-201ENST00000378113 WRNQ14191 1432 aaPredicted RBP eCLIP29.43■■■□□ 2.3
C12orf42-201ENST00000378113 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
C12orf42-201ENST00000378113 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
C12orf42-201ENST00000378113 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
C12orf42-201ENST00000378113 ADAMTS12P58397 1594 aa29.4■■■□□ 2.3
C12orf42-201ENST00000378113 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
C12orf42-201ENST00000378113 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
C12orf42-201ENST00000378113 NUP160Q12769 1436 aa29.35■■■□□ 2.29
C12orf42-201ENST00000378113 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
C12orf42-201ENST00000378113 SHROOM2Q13796 1616 aa29.26■■■□□ 2.28
C12orf42-201ENST00000378113 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
C12orf42-201ENST00000378113 PRG4Q92954 1404 aaPredicted RBP29.05■■■□□ 2.24
C12orf42-201ENST00000378113 JPH4Q96JJ6 628 aa29■■■□□ 2.23
C12orf42-201ENST00000378113 RUSC2Q8N2Y8 1516 aa29■■■□□ 2.23
C12orf42-201ENST00000378113 KIF13AQ9H1H9 1805 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms