Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.31□□□□□ -0.12
CLOCKO15516 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.31□□□□□ -0.12
CLOCKO15516 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLOCKO15516 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CLOCKO15516 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 AL512638.1-201ENST00000457493 794 ntBASIC14.31□□□□□ -0.12
CLOCKO15516 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.31□□□□□ -0.12
CLOCKO15516 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.31□□□□□ -0.12
CLOCKO15516 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.31□□□□□ -0.12
CLOCKO15516 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 AC140878.1-201ENST00000565277 250 ntBASIC14.31□□□□□ -0.12
CLOCKO15516 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.31□□□□□ -0.12
CLOCKO15516 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 AC003101.2-201ENST00000612557 442 ntBASIC14.31□□□□□ -0.12
CLOCKO15516 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.31□□□□□ -0.12
CLOCKO15516 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.31□□□□□ -0.12
CLOCKO15516 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.31□□□□□ -0.12
CLOCKO15516 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
CLOCKO15516 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.31□□□□□ -0.12
CLOCKO15516 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CLOCKO15516 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLOCKO15516 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLOCKO15516 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC105206.1-202ENST00000314927 2368 ntBASIC14.3□□□□□ -0.12
CLOCKO15516 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLOCKO15516 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLOCKO15516 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC104457.1-201ENST00000401024 814 ntBASIC14.3□□□□□ -0.12
CLOCKO15516 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.3□□□□□ -0.12
CLOCKO15516 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC069120.2-201ENST00000524091 540 ntBASIC14.3□□□□□ -0.12
CLOCKO15516 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.3□□□□□ -0.12
CLOCKO15516 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.3□□□□□ -0.12
CLOCKO15516 MIR4453-201ENST00000584019 89 ntBASIC14.3□□□□□ -0.12
CLOCKO15516 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CLOCKO15516 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CLOCKO15516 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CLOCKO15516 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLOCKO15516 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms