RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
CTCFL-205ENST00000423479 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
CTCFL-205ENST00000423479 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
CTCFL-205ENST00000423479 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
CTCFL-205ENST00000423479 HRCP23327 699 aa23.83■■□□□ 1.41
CTCFL-205ENST00000423479 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
CTCFL-205ENST00000423479 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
CTCFL-205ENST00000423479 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
CTCFL-205ENST00000423479 ABCC9O60706 1549 aa23.5■■□□□ 1.35
CTCFL-205ENST00000423479 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
CTCFL-205ENST00000423479 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
CTCFL-205ENST00000423479 PCGF6Q9BYE7 350 aa23.41■■□□□ 1.34
CTCFL-205ENST00000423479 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
CTCFL-205ENST00000423479 NACADO15069 1562 aa23.14■■□□□ 1.3
CTCFL-205ENST00000423479 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
CTCFL-205ENST00000423479 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
CTCFL-205ENST00000423479 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
CTCFL-205ENST00000423479 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
CTCFL-205ENST00000423479 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
CTCFL-205ENST00000423479 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
CTCFL-205ENST00000423479 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
CTCFL-205ENST00000423479 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
CTCFL-205ENST00000423479 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
CTCFL-205ENST00000423479 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
CTCFL-205ENST00000423479 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
CTCFL-205ENST00000423479 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
CTCFL-205ENST00000423479 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
CTCFL-205ENST00000423479 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
CTCFL-205ENST00000423479 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
CTCFL-205ENST00000423479 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
CTCFL-205ENST00000423479 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
CTCFL-205ENST00000423479 WIZO95785 1651 aa21.97■■□□□ 1.11
CTCFL-205ENST00000423479 ACIN1Q9UKV3 1341 aaKnown RBP21.95■■□□□ 1.1
CTCFL-205ENST00000423479 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
CTCFL-205ENST00000423479 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
CTCFL-205ENST00000423479 MYT1Q01538 1121 aa21.83■■□□□ 1.08
CTCFL-205ENST00000423479 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
CTCFL-205ENST00000423479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.07
CTCFL-205ENST00000423479 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
CTCFL-205ENST00000423479 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
CTCFL-205ENST00000423479 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
CTCFL-205ENST00000423479 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
CTCFL-205ENST00000423479 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
CTCFL-205ENST00000423479 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
CTCFL-205ENST00000423479 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
CTCFL-205ENST00000423479 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
CTCFL-205ENST00000423479 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
CTCFL-205ENST00000423479 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
CTCFL-205ENST00000423479 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
CTCFL-205ENST00000423479 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
CTCFL-205ENST00000423479 ZNF316A6NFI3 1004 aaPredicted RBP21.35■■□□□ 1.01
CTCFL-205ENST00000423479 NCAPD3P42695 1498 aa21.32■■□□□ 1
CTCFL-205ENST00000423479 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
CTCFL-205ENST00000423479 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
CTCFL-205ENST00000423479 YTHDC1Q96MU7 727 aaKnown RBP21.24■□□□□ 0.99
CTCFL-205ENST00000423479 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
CTCFL-205ENST00000423479 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
CTCFL-205ENST00000423479 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.97
CTCFL-205ENST00000423479 MIER1Q8N108 512 aa21.13■□□□□ 0.97
CTCFL-205ENST00000423479 SOGA1O94964 1423 aa21.06■□□□□ 0.96
CTCFL-205ENST00000423479 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
CTCFL-205ENST00000423479 EEA1Q15075 1411 aa20.99■□□□□ 0.95
CTCFL-205ENST00000423479 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
CTCFL-205ENST00000423479 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
CTCFL-205ENST00000423479 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
CTCFL-205ENST00000423479 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
CTCFL-205ENST00000423479 CFTRP13569 1480 aa20.9■□□□□ 0.94
CTCFL-205ENST00000423479 GOLGA3Q08378 1498 aa20.89■□□□□ 0.94
CTCFL-205ENST00000423479 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
CTCFL-205ENST00000423479 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
CTCFL-205ENST00000423479 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
CTCFL-205ENST00000423479 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
CTCFL-205ENST00000423479 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
CTCFL-205ENST00000423479 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
CTCFL-205ENST00000423479 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
CTCFL-205ENST00000423479 CLIP1P30622 1438 aa20.7■□□□□ 0.9
CTCFL-205ENST00000423479 APLP2Q06481 763 aa20.69■□□□□ 0.9
CTCFL-205ENST00000423479 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
CTCFL-205ENST00000423479 CUX1P39880 1505 aa20.67■□□□□ 0.9
CTCFL-205ENST00000423479 NESP48681 1621 aa20.66■□□□□ 0.9
CTCFL-205ENST00000423479 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
CTCFL-205ENST00000423479 KIF21BO75037 1637 aa20.64■□□□□ 0.89
CTCFL-205ENST00000423479 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
CTCFL-205ENST00000423479 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CTCFL-205ENST00000423479 TSHZ2Q9NRE2 1034 aa20.59■□□□□ 0.89
CTCFL-205ENST00000423479 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
CTCFL-205ENST00000423479 DHX57Q6P158 1386 aaKnown RBP20.55■□□□□ 0.88
CTCFL-205ENST00000423479 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
CTCFL-205ENST00000423479 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
CTCFL-205ENST00000423479 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
CTCFL-205ENST00000423479 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
CTCFL-205ENST00000423479 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
CTCFL-205ENST00000423479 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
CTCFL-205ENST00000423479 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
CTCFL-205ENST00000423479 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
CTCFL-205ENST00000423479 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
CTCFL-205ENST00000423479 CUX2O14529 1486 aa20.32■□□□□ 0.84
CTCFL-205ENST00000423479 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
CTCFL-205ENST00000423479 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
CTCFL-205ENST00000423479 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms