Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
RNF2Q99496 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RNF2Q99496 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF2Q99496 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF2Q99496 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
RNF2Q99496 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 IGHV3-42-201ENST00000520410 361 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 DUX4L27-201ENST00000554796 1261 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RNF2Q99496 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.02□□□□□ -0.49
RNF2Q99496 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF2Q99496 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 TEX28P1-201ENST00000613479 1221 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 TEX28P2-201ENST00000617764 1221 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.02□□□□□ -0.49
RNF2Q99496 AL033527.5-202ENST00000641632 1098 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 AC018442.1-201ENST00000421439 2061 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 AC092135.3-201ENST00000624151 1846 ntBASIC12.02□□□□□ -0.49
RNF2Q99496 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RNF2Q99496 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.02□□□□□ -0.49
RNF2Q99496 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF2Q99496 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF2Q99496 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
RNF2Q99496 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RNF2Q99496 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF2Q99496 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF2Q99496 TPT1P11-201ENST00000458482 498 ntBASIC12.01□□□□□ -0.49
RNF2Q99496 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.01□□□□□ -0.49
RNF2Q99496 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms