Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM4P67936 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TPM4P67936 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM4P67936 AL354702.1-201ENST00000442006 1960 ntBASIC16.88■□□□□ 0.29
TPM4P67936 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPM4P67936 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM4P67936 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM4P67936 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 MIR940-201ENST00000401276 94 ntBASIC16.87■□□□□ 0.29
TPM4P67936 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 SPDYE7P-202ENST00000420373 878 ntBASIC16.87■□□□□ 0.29
TPM4P67936 SPDYE14P-201ENST00000442619 822 ntBASIC16.87■□□□□ 0.29
TPM4P67936 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM4P67936 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM4P67936 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 AC026150.2-201ENST00000564693 1156 ntBASIC16.87■□□□□ 0.29
TPM4P67936 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
TPM4P67936 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM4P67936 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM4P67936 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM4P67936 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 AL122018.1-201ENST00000446607 2310 ntBASIC16.86■□□□□ 0.29
TPM4P67936 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TPM4P67936 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM4P67936 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TPM4P67936 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.86■□□□□ 0.29
TPM4P67936 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.86■□□□□ 0.29
TPM4P67936 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
TPM4P67936 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.86■□□□□ 0.29
TPM4P67936 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 MIR4453-201ENST00000584019 89 ntBASIC16.86■□□□□ 0.29
TPM4P67936 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM4P67936 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.86■□□□□ 0.29
TPM4P67936 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM4P67936 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM4P67936 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM4P67936 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms