Protein–RNA interactions for Protein: P04637

TP53, Cellular tumor antigen p53, humanhuman

Predicted RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP53P04637 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.85□□□□□ -0.19
TP53P04637 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TP53P04637 ST20-AS1-201ENST00000560255 4223 ntBASIC13.85□□□□□ -0.19
TP53P04637 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TP53P04637 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TP53P04637 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 AC055811.4-201ENST00000624039 1754 ntBASIC13.84□□□□□ -0.19
TP53P04637 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 SERBP1P3-201ENST00000459980 809 ntBASIC13.84□□□□□ -0.19
TP53P04637 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 AC010336.2-201ENST00000564226 506 ntBASIC13.84□□□□□ -0.19
TP53P04637 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.84□□□□□ -0.19
TP53P04637 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.84□□□□□ -0.19
TP53P04637 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TP53P04637 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.84□□□□□ -0.19
TP53P04637 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 AC010327.5-201ENST00000586923 3061 ntBASIC13.84□□□□□ -0.19
TP53P04637 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TP53P04637 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TP53P04637 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TP53P04637 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.83□□□□□ -0.19
TP53P04637 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TP53P04637 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TP53P04637 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.83□□□□□ -0.2
TP53P04637 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 MEIS3P1-201ENST00000495167 958 ntBASIC13.83□□□□□ -0.2
TP53P04637 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.83□□□□□ -0.2
TP53P04637 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.83□□□□□ -0.2
TP53P04637 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.83□□□□□ -0.2
TP53P04637 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TP53P04637 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
TP53P04637 AC074044.1-201ENST00000609673 707 ntBASIC13.83□□□□□ -0.2
TP53P04637 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.83□□□□□ -0.2
TP53P04637 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.83□□□□□ -0.2
TP53P04637 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TP53P04637 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.83□□□□□ -0.2
TP53P04637 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TP53P04637 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TP53P04637 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TP53P04637 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP53P04637 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms