Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RAB3IL1Q8TBN0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IL1Q8TBN0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB3IL1Q8TBN0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 AL354702.1-201ENST00000442006 1960 ntBASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 AC023090.2-201ENST00000625182 2110 ntBASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB3IL1Q8TBN0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 UPF3AP3-201ENST00000420996 769 ntBASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 AL133215.2-201ENST00000609242 977 ntBASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 AC018529.1-201ENST00000613063 361 ntBASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 AL035456.1-201ENST00000456064 1369 ntBASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 KRT8P22-201ENST00000562317 1415 ntBASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RAB3IL1Q8TBN0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC015922.1-201ENST00000421102 1152 ntBASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AL592309.1-201ENST00000443127 649 ntBASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 SAMD11P1-201ENST00000571429 661 ntBASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 AL691403.2-201ENST00000618460 490 ntBASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IL1Q8TBN0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms