RNA–Protein interactions for RNA: ENST00000590016.5

RAD51D-218, Transcript of RAD51 paralog D, humanhuman

TSL 2 BASIC

Gene RAD51D, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-218ENST00000590016 NISCHQ9Y2I1 1504 aa38.66■■■■□ 3.78
RAD51D-218ENST00000590016 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
RAD51D-218ENST00000590016 ABCC9O60706 1549 aa33.71■■■□□ 2.99
RAD51D-218ENST00000590016 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
RAD51D-218ENST00000590016 NACADO15069 1562 aa32.39■■■□□ 2.77
RAD51D-218ENST00000590016 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
RAD51D-218ENST00000590016 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
RAD51D-218ENST00000590016 ZCCHC6Q5VYS8 1495 aaKnown RBP32.17■■■□□ 2.74
RAD51D-218ENST00000590016 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.72
RAD51D-218ENST00000590016 UNC13AQ9UPW8 1703 aa31.67■■■□□ 2.66
RAD51D-218ENST00000590016 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
RAD51D-218ENST00000590016 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
RAD51D-218ENST00000590016 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
RAD51D-218ENST00000590016 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
RAD51D-218ENST00000590016 DNAJC5BQ9UF47 199 aa31.03■■■□□ 2.56
RAD51D-218ENST00000590016 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
RAD51D-218ENST00000590016 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
RAD51D-218ENST00000590016 CECR2Q9BXF3 1484 aa30.32■■■□□ 2.44
RAD51D-218ENST00000590016 SMARCA4P51532 1647 aa30.01■■■□□ 2.39
RAD51D-218ENST00000590016 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
RAD51D-218ENST00000590016 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
RAD51D-218ENST00000590016 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
RAD51D-218ENST00000590016 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
RAD51D-218ENST00000590016 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
RAD51D-218ENST00000590016 PEG3Q9GZU2 1588 aa29.74■■■□□ 2.35
RAD51D-218ENST00000590016 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
RAD51D-218ENST00000590016 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
RAD51D-218ENST00000590016 WIZO95785 1651 aa29.43■■■□□ 2.3
RAD51D-218ENST00000590016 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
RAD51D-218ENST00000590016 NESP48681 1621 aa29.15■■■□□ 2.26
RAD51D-218ENST00000590016 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.26
RAD51D-218ENST00000590016 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
RAD51D-218ENST00000590016 ERCC6Q03468 1493 aa29.09■■■□□ 2.25
RAD51D-218ENST00000590016 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
RAD51D-218ENST00000590016 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
RAD51D-218ENST00000590016 CUX2O14529 1486 aa28.84■■■□□ 2.21
RAD51D-218ENST00000590016 CFTRP13569 1480 aa28.81■■■□□ 2.2
RAD51D-218ENST00000590016 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
RAD51D-218ENST00000590016 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
RAD51D-218ENST00000590016 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
RAD51D-218ENST00000590016 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
RAD51D-218ENST00000590016 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
RAD51D-218ENST00000590016 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
RAD51D-218ENST00000590016 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
RAD51D-218ENST00000590016 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
RAD51D-218ENST00000590016 WDR62O43379 1518 aa28.52■■■□□ 2.16
RAD51D-218ENST00000590016 URB2Q14146 1524 aaKnown RBP28.37■■■□□ 2.13
RAD51D-218ENST00000590016 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
RAD51D-218ENST00000590016 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
RAD51D-218ENST00000590016 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
RAD51D-218ENST00000590016 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
RAD51D-218ENST00000590016 IFT140Q96RY7 1462 aa28.05■■■□□ 2.08
RAD51D-218ENST00000590016 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
RAD51D-218ENST00000590016 CUX1P39880 1505 aa27.93■■■□□ 2.06
RAD51D-218ENST00000590016 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
RAD51D-218ENST00000590016 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.05
RAD51D-218ENST00000590016 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
RAD51D-218ENST00000590016 SOGA1O94964 1423 aa27.84■■■□□ 2.05
RAD51D-218ENST00000590016 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
RAD51D-218ENST00000590016 EIF4G3O43432 1585 aaKnown RBP27.79■■■□□ 2.04
RAD51D-218ENST00000590016 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.035e-11■■■■■ 40
RAD51D-218ENST00000590016 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.034e-7■■■■□ 26
RAD51D-218ENST00000590016 WDR97A6NE52 1622 aa27.7■■■□□ 2.03
RAD51D-218ENST00000590016 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
RAD51D-218ENST00000590016 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
RAD51D-218ENST00000590016 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
RAD51D-218ENST00000590016 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
RAD51D-218ENST00000590016 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
RAD51D-218ENST00000590016 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
RAD51D-218ENST00000590016 GRIN2BQ13224 1484 aa27.53■■■□□ 2
RAD51D-218ENST00000590016 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
RAD51D-218ENST00000590016 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
RAD51D-218ENST00000590016 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
RAD51D-218ENST00000590016 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
RAD51D-218ENST00000590016 CHD1O14646 1710 aa27.46■■□□□ 1.99
RAD51D-218ENST00000590016 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
RAD51D-218ENST00000590016 FBLN2P98095 1184 aa27.41■■□□□ 1.98
RAD51D-218ENST00000590016 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
RAD51D-218ENST00000590016 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
RAD51D-218ENST00000590016 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
RAD51D-218ENST00000590016 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
RAD51D-218ENST00000590016 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
RAD51D-218ENST00000590016 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
RAD51D-218ENST00000590016 CLASP1Q7Z460 1538 aa27.17■■□□□ 1.94
RAD51D-218ENST00000590016 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
RAD51D-218ENST00000590016 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
RAD51D-218ENST00000590016 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
RAD51D-218ENST00000590016 GRIN2AQ12879 1464 aa27.16■■□□□ 1.94
RAD51D-218ENST00000590016 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
RAD51D-218ENST00000590016 IGF1RP08069 1367 aa27.07■■□□□ 1.92
RAD51D-218ENST00000590016 NUP160Q12769 1436 aa27.06■■□□□ 1.92
RAD51D-218ENST00000590016 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
RAD51D-218ENST00000590016 CEP170Q5SW79 1584 aa27.01■■□□□ 1.91
RAD51D-218ENST00000590016 CUL7Q14999 1698 aa27.01■■□□□ 1.91
RAD51D-218ENST00000590016 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
RAD51D-218ENST00000590016 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
RAD51D-218ENST00000590016 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
RAD51D-218ENST00000590016 SHROOM2Q13796 1616 aa26.86■■□□□ 1.89
RAD51D-218ENST00000590016 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
RAD51D-218ENST00000590016 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms