Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 HSPA7-201ENST00000445535 1927 ntBASIC14.23□□□□□ -0.13
CLK1P49759 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.23□□□□□ -0.13
CLK1P49759 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLK1P49759 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.23□□□□□ -0.13
CLK1P49759 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLK1P49759 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.22□□□□□ -0.13
CLK1P49759 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLK1P49759 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.22□□□□□ -0.13
CLK1P49759 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.22□□□□□ -0.13
CLK1P49759 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.22□□□□□ -0.13
CLK1P49759 FAM8A3P-201ENST00000427218 844 ntBASIC14.22□□□□□ -0.13
CLK1P49759 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.22□□□□□ -0.13
CLK1P49759 AC009477.1-201ENST00000452936 217 ntBASIC14.22□□□□□ -0.13
CLK1P49759 CYMP-203ENST00000474680 1263 ntBASIC14.22□□□□□ -0.13
CLK1P49759 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.22□□□□□ -0.13
CLK1P49759 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.22□□□□□ -0.13
CLK1P49759 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CLK1P49759 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 AC127383.1-201ENST00000444697 1800 ntBASIC14.22□□□□□ -0.13
CLK1P49759 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLK1P49759 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.22□□□□□ -0.13
CLK1P49759 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.21□□□□□ -0.13
CLK1P49759 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 CICP20-201ENST00000443330 2801 ntBASIC14.21□□□□□ -0.13
CLK1P49759 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.21□□□□□ -0.13
CLK1P49759 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.21□□□□□ -0.13
CLK1P49759 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLK1P49759 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.21□□□□□ -0.13
CLK1P49759 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms