Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.76■□□□□ 0.11
SHKBP1Q8TBC3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AC090616.6-203ENST00000579186 1945 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 GHSR-202ENST00000427970 912 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AC016700.1-201ENST00000429424 312 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 MIR4683-201ENST00000579659 81 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SHKBP1Q8TBC3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 RNA5SP423-201ENST00000517127 109 ntBASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 NDUFV2P1-201ENST00000596415 907 ntBASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms