RNA–Protein interactions for RNA: ENST00000630422.2

CCNA1-204, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-204ENST00000630422 NISCHQ9Y2I1 1504 aa36.51■■■■□ 3.44
CCNA1-204ENST00000630422 ABCC9O60706 1549 aa33.16■■■□□ 2.9
CCNA1-204ENST00000630422 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
CCNA1-204ENST00000630422 RB1CC1Q8TDY2 1594 aa31.42■■■□□ 2.62
CCNA1-204ENST00000630422 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
CCNA1-204ENST00000630422 NACADO15069 1562 aa31.13■■■□□ 2.57
CCNA1-204ENST00000630422 DCAF8L2P0C7V8 631 aa30.99■■■□□ 2.55
CCNA1-204ENST00000630422 PABPN1Q86U42 306 aaKnown RBP eCLIP30.84■■■□□ 2.53
CCNA1-204ENST00000630422 UNC13AQ9UPW8 1703 aa30.76■■■□□ 2.52
CCNA1-204ENST00000630422 MYO15BQ96JP2 1530 aa30.58■■■□□ 2.49
CCNA1-204ENST00000630422 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
CCNA1-204ENST00000630422 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
CCNA1-204ENST00000630422 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
CCNA1-204ENST00000630422 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
CCNA1-204ENST00000630422 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
CCNA1-204ENST00000630422 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
CCNA1-204ENST00000630422 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
CCNA1-204ENST00000630422 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
CCNA1-204ENST00000630422 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
CCNA1-204ENST00000630422 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
CCNA1-204ENST00000630422 CUX2O14529 1486 aa28.64■■■□□ 2.17
CCNA1-204ENST00000630422 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
CCNA1-204ENST00000630422 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
CCNA1-204ENST00000630422 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
CCNA1-204ENST00000630422 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
CCNA1-204ENST00000630422 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
CCNA1-204ENST00000630422 NESP48681 1621 aa28.42■■■□□ 2.14
CCNA1-204ENST00000630422 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
CCNA1-204ENST00000630422 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
CCNA1-204ENST00000630422 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
CCNA1-204ENST00000630422 THOC2Q8NI27 1593 aaKnown RBP28.17■■■□□ 2.1
CCNA1-204ENST00000630422 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
CCNA1-204ENST00000630422 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
CCNA1-204ENST00000630422 KIF21AQ7Z4S6 1674 aa28.06■■■□□ 2.08
CCNA1-204ENST00000630422 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
CCNA1-204ENST00000630422 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
CCNA1-204ENST00000630422 WIZO95785 1651 aa27.83■■■□□ 2.04
CCNA1-204ENST00000630422 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
CCNA1-204ENST00000630422 WDR62O43379 1518 aa27.7■■■□□ 2.03
CCNA1-204ENST00000630422 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
CCNA1-204ENST00000630422 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
CCNA1-204ENST00000630422 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
CCNA1-204ENST00000630422 CFTRP13569 1480 aa27.49■■□□□ 1.99
CCNA1-204ENST00000630422 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
CCNA1-204ENST00000630422 TOP2AP11388 1531 aaKnown RBP27.42■■□□□ 1.98
CCNA1-204ENST00000630422 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
CCNA1-204ENST00000630422 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
CCNA1-204ENST00000630422 PRDM2Q13029 1718 aa27.23■■□□□ 1.95
CCNA1-204ENST00000630422 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
CCNA1-204ENST00000630422 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
CCNA1-204ENST00000630422 IFT140Q96RY7 1462 aa27.05■■□□□ 1.92
CCNA1-204ENST00000630422 TOPBP1Q92547 1522 aa27.01■■□□□ 1.91
CCNA1-204ENST00000630422 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.91
CCNA1-204ENST00000630422 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.91
CCNA1-204ENST00000630422 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.91
CCNA1-204ENST00000630422 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
CCNA1-204ENST00000630422 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
CCNA1-204ENST00000630422 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
CCNA1-204ENST00000630422 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
CCNA1-204ENST00000630422 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
CCNA1-204ENST00000630422 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.88
CCNA1-204ENST00000630422 CHD1O14646 1710 aa26.78■■□□□ 1.88
CCNA1-204ENST00000630422 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CCNA1-204ENST00000630422 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
CCNA1-204ENST00000630422 FBLN2P98095 1184 aa26.69■■□□□ 1.86
CCNA1-204ENST00000630422 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
CCNA1-204ENST00000630422 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
CCNA1-204ENST00000630422 SOGA1O94964 1423 aa26.59■■□□□ 1.85
CCNA1-204ENST00000630422 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
CCNA1-204ENST00000630422 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
CCNA1-204ENST00000630422 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
CCNA1-204ENST00000630422 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
CCNA1-204ENST00000630422 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
CCNA1-204ENST00000630422 CUX1P39880 1505 aa26.46■■□□□ 1.83
CCNA1-204ENST00000630422 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
CCNA1-204ENST00000630422 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
CCNA1-204ENST00000630422 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
CCNA1-204ENST00000630422 SYNJ1O43426 1573 aa26.39■■□□□ 1.81
CCNA1-204ENST00000630422 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
CCNA1-204ENST00000630422 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
CCNA1-204ENST00000630422 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
CCNA1-204ENST00000630422 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.8
CCNA1-204ENST00000630422 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
CCNA1-204ENST00000630422 ABCA10Q8WWZ4 1543 aa26.18■■□□□ 1.78
CCNA1-204ENST00000630422 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
CCNA1-204ENST00000630422 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
CCNA1-204ENST00000630422 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
CCNA1-204ENST00000630422 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
CCNA1-204ENST00000630422 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
CCNA1-204ENST00000630422 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
CCNA1-204ENST00000630422 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
CCNA1-204ENST00000630422 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
CCNA1-204ENST00000630422 NUP160Q12769 1436 aa25.96■■□□□ 1.75
CCNA1-204ENST00000630422 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
CCNA1-204ENST00000630422 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
CCNA1-204ENST00000630422 SHROOM2Q13796 1616 aa25.89■■□□□ 1.73
CCNA1-204ENST00000630422 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
CCNA1-204ENST00000630422 PRG4Q92954 1404 aaPredicted RBP25.75■■□□□ 1.71
CCNA1-204ENST00000630422 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
CCNA1-204ENST00000630422 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms