Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 AL627223.1-201ENST00000416693 442 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 AC015922.1-201ENST00000421102 1152 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 FAM58DP-201ENST00000428076 619 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 RBPMS2P1-201ENST00000437762 623 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.33□□□□□ -0.44
SPCS3P61009 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.33□□□□□ -0.44
SPCS3P61009 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.33□□□□□ -0.44
SPCS3P61009 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.33□□□□□ -0.44
SPCS3P61009 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.33□□□□□ -0.44
SPCS3P61009 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.33□□□□□ -0.44
SPCS3P61009 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.33□□□□□ -0.44
SPCS3P61009 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SPCS3P61009 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
SPCS3P61009 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 PPT1-213ENST00000641319 2388 ntBASIC12.33□□□□□ -0.44
SPCS3P61009 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS3P61009 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.32□□□□□ -0.44
SPCS3P61009 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SPCS3P61009 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 KRT18P43-201ENST00000469825 1281 ntBASIC12.32□□□□□ -0.44
SPCS3P61009 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.32□□□□□ -0.44
SPCS3P61009 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS3P61009 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.32□□□□□ -0.44
SPCS3P61009 AL513210.1-201ENST00000629608 234 ntBASIC12.32□□□□□ -0.44
SPCS3P61009 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS3P61009 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms