Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RNF144AP50876 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 AC134915.1-201ENST00000426461 574 ntBASIC14.06□□□□□ -0.16
RNF144AP50876 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 AC004066.1-201ENST00000502488 802 ntBASIC14.06□□□□□ -0.16
RNF144AP50876 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.06□□□□□ -0.16
RNF144AP50876 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RNF144AP50876 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 BRI3BPP1-201ENST00000594224 787 ntBASIC14.06□□□□□ -0.16
RNF144AP50876 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.06□□□□□ -0.16
RNF144AP50876 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 AC097359.2-201ENST00000604992 2389 ntBASIC14.06□□□□□ -0.16
RNF144AP50876 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNF144AP50876 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RNF144AP50876 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.06□□□□□ -0.16
RNF144AP50876 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RNF144AP50876 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
RNF144AP50876 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
RNF144AP50876 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 TERF1P3-201ENST00000505638 1227 ntBASIC14.05□□□□□ -0.16
RNF144AP50876 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF144AP50876 AC092552.1-201ENST00000547243 906 ntBASIC14.05□□□□□ -0.16
RNF144AP50876 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms