RNA–Protein interactions for RNA: ENST00000586440.1

SMIM22-202, Transcript of small integral membrane protein 22, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMIM22, Length 549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-202ENST00000586440 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
SMIM22-202ENST00000586440 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
SMIM22-202ENST00000586440 ABCC9O60706 1549 aa33.44■■■□□ 2.94
SMIM22-202ENST00000586440 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
SMIM22-202ENST00000586440 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
SMIM22-202ENST00000586440 NACADO15069 1562 aa31.96■■■□□ 2.71
SMIM22-202ENST00000586440 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
SMIM22-202ENST00000586440 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
SMIM22-202ENST00000586440 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
SMIM22-202ENST00000586440 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
SMIM22-202ENST00000586440 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
SMIM22-202ENST00000586440 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
SMIM22-202ENST00000586440 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
SMIM22-202ENST00000586440 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
SMIM22-202ENST00000586440 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
SMIM22-202ENST00000586440 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
SMIM22-202ENST00000586440 CC2D2AQ9P2K1 1620 aa30.25■■■□□ 2.43
SMIM22-202ENST00000586440 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
SMIM22-202ENST00000586440 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
SMIM22-202ENST00000586440 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
SMIM22-202ENST00000586440 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
SMIM22-202ENST00000586440 NCAPD3P42695 1498 aa29.48■■■□□ 2.31
SMIM22-202ENST00000586440 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
SMIM22-202ENST00000586440 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
SMIM22-202ENST00000586440 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
SMIM22-202ENST00000586440 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
SMIM22-202ENST00000586440 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
SMIM22-202ENST00000586440 WIZO95785 1651 aa29.11■■■□□ 2.25
SMIM22-202ENST00000586440 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
SMIM22-202ENST00000586440 NESP48681 1621 aa28.91■■■□□ 2.22
SMIM22-202ENST00000586440 ERCC6Q03468 1493 aa28.81■■■□□ 2.2
SMIM22-202ENST00000586440 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
SMIM22-202ENST00000586440 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
SMIM22-202ENST00000586440 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
SMIM22-202ENST00000586440 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
SMIM22-202ENST00000586440 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
SMIM22-202ENST00000586440 CUX2O14529 1486 aa28.55■■■□□ 2.16
SMIM22-202ENST00000586440 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
SMIM22-202ENST00000586440 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
SMIM22-202ENST00000586440 CFTRP13569 1480 aa28.41■■■□□ 2.14
SMIM22-202ENST00000586440 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
SMIM22-202ENST00000586440 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
SMIM22-202ENST00000586440 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
SMIM22-202ENST00000586440 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
SMIM22-202ENST00000586440 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
SMIM22-202ENST00000586440 WDR62O43379 1518 aa28.2■■■□□ 2.1
SMIM22-202ENST00000586440 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
SMIM22-202ENST00000586440 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
SMIM22-202ENST00000586440 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
SMIM22-202ENST00000586440 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
SMIM22-202ENST00000586440 ABCC8Q09428 1581 aa27.78■■■□□ 2.04
SMIM22-202ENST00000586440 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
SMIM22-202ENST00000586440 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
SMIM22-202ENST00000586440 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
SMIM22-202ENST00000586440 CUX1P39880 1505 aa27.58■■■□□ 2.01
SMIM22-202ENST00000586440 TARBP1Q13395 1621 aaKnown RBP27.57■■■□□ 2
SMIM22-202ENST00000586440 FGD5Q6ZNL6 1462 aa27.51■■■□□ 2
SMIM22-202ENST00000586440 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
SMIM22-202ENST00000586440 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
SMIM22-202ENST00000586440 SOGA1O94964 1423 aa27.48■■□□□ 1.99
SMIM22-202ENST00000586440 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
SMIM22-202ENST00000586440 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
SMIM22-202ENST00000586440 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
SMIM22-202ENST00000586440 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
SMIM22-202ENST00000586440 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
SMIM22-202ENST00000586440 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
SMIM22-202ENST00000586440 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
SMIM22-202ENST00000586440 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
SMIM22-202ENST00000586440 CHD1O14646 1710 aa27.24■■□□□ 1.95
SMIM22-202ENST00000586440 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
SMIM22-202ENST00000586440 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
SMIM22-202ENST00000586440 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
SMIM22-202ENST00000586440 FBLN2P98095 1184 aa27.16■■□□□ 1.94
SMIM22-202ENST00000586440 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
SMIM22-202ENST00000586440 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
SMIM22-202ENST00000586440 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
SMIM22-202ENST00000586440 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
SMIM22-202ENST00000586440 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
SMIM22-202ENST00000586440 SYNJ2O15056 1496 aa27■■□□□ 1.91
SMIM22-202ENST00000586440 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
SMIM22-202ENST00000586440 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
SMIM22-202ENST00000586440 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
SMIM22-202ENST00000586440 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
SMIM22-202ENST00000586440 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
SMIM22-202ENST00000586440 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
SMIM22-202ENST00000586440 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.89
SMIM22-202ENST00000586440 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
SMIM22-202ENST00000586440 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
SMIM22-202ENST00000586440 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
SMIM22-202ENST00000586440 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
SMIM22-202ENST00000586440 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
SMIM22-202ENST00000586440 ARAP1Q96P48 1450 aa26.71■■□□□ 1.87
SMIM22-202ENST00000586440 CYB5RLQ6IPT4 315 aa26.7■■□□□ 1.86
SMIM22-202ENST00000586440 NUP160Q12769 1436 aa26.7■■□□□ 1.86
SMIM22-202ENST00000586440 IGF1RP08069 1367 aa26.67■■□□□ 1.86
SMIM22-202ENST00000586440 CUL7Q14999 1698 aa26.62■■□□□ 1.85
SMIM22-202ENST00000586440 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
SMIM22-202ENST00000586440 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
SMIM22-202ENST00000586440 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
SMIM22-202ENST00000586440 CARMIL1Q5VZK9 1371 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms