RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
TBC1D1-201ENST00000261439 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
TBC1D1-201ENST00000261439 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
TBC1D1-201ENST00000261439 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
TBC1D1-201ENST00000261439 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
TBC1D1-201ENST00000261439 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
TBC1D1-201ENST00000261439 PCGF6Q9BYE7 350 aa22.81■■□□□ 1.24
TBC1D1-201ENST00000261439 APLP2Q06481 763 aa22.66■■□□□ 1.22
TBC1D1-201ENST00000261439 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
TBC1D1-201ENST00000261439 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.22
TBC1D1-201ENST00000261439 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
TBC1D1-201ENST00000261439 ERICH6Q7L0X2 663 aa22.38■■□□□ 1.17
TBC1D1-201ENST00000261439 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
TBC1D1-201ENST00000261439 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
TBC1D1-201ENST00000261439 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
TBC1D1-201ENST00000261439 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
TBC1D1-201ENST00000261439 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
TBC1D1-201ENST00000261439 MYT1Q01538 1121 aa21.95■■□□□ 1.1
TBC1D1-201ENST00000261439 NEFLP07196 543 aa21.89■■□□□ 1.09
TBC1D1-201ENST00000261439 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
TBC1D1-201ENST00000261439 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
TBC1D1-201ENST00000261439 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
TBC1D1-201ENST00000261439 HRCP23327 699 aa21.66■■□□□ 1.06
TBC1D1-201ENST00000261439 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
TBC1D1-201ENST00000261439 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
TBC1D1-201ENST00000261439 ITGAEP38570 1179 aa21.3■■□□□ 1
TBC1D1-201ENST00000261439 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
TBC1D1-201ENST00000261439 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
TBC1D1-201ENST00000261439 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
TBC1D1-201ENST00000261439 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
TBC1D1-201ENST00000261439 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
TBC1D1-201ENST00000261439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
TBC1D1-201ENST00000261439 DIEXFQ68CQ4 756 aaKnown RBP21.08■□□□□ 0.96
TBC1D1-201ENST00000261439 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
TBC1D1-201ENST00000261439 GTF3C3Q9Y5Q9 886 aa20.88■□□□□ 0.93
TBC1D1-201ENST00000261439 BCANQ96GW7 911 aa20.84■□□□□ 0.93
TBC1D1-201ENST00000261439 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.92
TBC1D1-201ENST00000261439 ZNF316A6NFI3 1004 aaPredicted RBP20.81■□□□□ 0.92
TBC1D1-201ENST00000261439 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
TBC1D1-201ENST00000261439 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
TBC1D1-201ENST00000261439 NEUROD1Q13562 356 aa20.62■□□□□ 0.89
TBC1D1-201ENST00000261439 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
TBC1D1-201ENST00000261439 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
TBC1D1-201ENST00000261439 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
TBC1D1-201ENST00000261439 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
TBC1D1-201ENST00000261439 ANP32CO43423 234 aa20.48■□□□□ 0.87
TBC1D1-201ENST00000261439 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
TBC1D1-201ENST00000261439 BCL11AQ9H165 835 aa20.22■□□□□ 0.83
TBC1D1-201ENST00000261439 ANP32AP39687 249 aaKnown RBP20.2■□□□□ 0.82
TBC1D1-201ENST00000261439 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
TBC1D1-201ENST00000261439 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
TBC1D1-201ENST00000261439 ZBTB47Q9UFB7 747 aaPredicted RBP20.16■□□□□ 0.82
TBC1D1-201ENST00000261439 FKBP8Q14318 412 aa20.14■□□□□ 0.81
TBC1D1-201ENST00000261439 EIF5BO60841 1220 aaKnown RBP20.1■□□□□ 0.81
TBC1D1-201ENST00000261439 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
TBC1D1-201ENST00000261439 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
TBC1D1-201ENST00000261439 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
TBC1D1-201ENST00000261439 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
TBC1D1-201ENST00000261439 HNRNPUQ00839 825 aaKnown RBP eCLIP19.93■□□□□ 0.78
TBC1D1-201ENST00000261439 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
TBC1D1-201ENST00000261439 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
TBC1D1-201ENST00000261439 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
TBC1D1-201ENST00000261439 NBR1Q14596 966 aa19.89■□□□□ 0.78
TBC1D1-201ENST00000261439 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
TBC1D1-201ENST00000261439 NEFMP07197 916 aa19.84■□□□□ 0.77
TBC1D1-201ENST00000261439 FBLN2P98095 1184 aa19.83■□□□□ 0.76
TBC1D1-201ENST00000261439 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
TBC1D1-201ENST00000261439 ANP32BQ92688 251 aaKnown RBP19.8■□□□□ 0.76
TBC1D1-201ENST00000261439 HSP90AA1P07900 732 aaKnown RBP19.79■□□□□ 0.76
TBC1D1-201ENST00000261439 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
TBC1D1-201ENST00000261439 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
TBC1D1-201ENST00000261439 ABCC9O60706 1549 aa19.75■□□□□ 0.75
TBC1D1-201ENST00000261439 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
TBC1D1-201ENST00000261439 MIER1Q8N108 512 aa19.74■□□□□ 0.75
TBC1D1-201ENST00000261439 ARXQ96QS3 562 aa19.74■□□□□ 0.75
TBC1D1-201ENST00000261439 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
TBC1D1-201ENST00000261439 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
TBC1D1-201ENST00000261439 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
TBC1D1-201ENST00000261439 GLIPR1L2Q4G1C9 344 aa19.66■□□□□ 0.74
TBC1D1-201ENST00000261439 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
TBC1D1-201ENST00000261439 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
TBC1D1-201ENST00000261439 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
TBC1D1-201ENST00000261439 CHIC2Q9UKJ5 165 aa19.54■□□□□ 0.72
TBC1D1-201ENST00000261439 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.52■□□□□ 0.72
TBC1D1-201ENST00000261439 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.72
TBC1D1-201ENST00000261439 WDR43Q15061 677 aaKnown RBP eCLIP19.45■□□□□ 0.7
TBC1D1-201ENST00000261439 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
TBC1D1-201ENST00000261439 KDM2AQ9Y2K7 1162 aa19.42■□□□□ 0.7
TBC1D1-201ENST00000261439 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
TBC1D1-201ENST00000261439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
TBC1D1-201ENST00000261439 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
TBC1D1-201ENST00000261439 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
TBC1D1-201ENST00000261439 EIF4G2P78344 907 aaKnown RBP eCLIP19.31■□□□□ 0.68
TBC1D1-201ENST00000261439 DDRGK1Q96HY6 314 aa19.31■□□□□ 0.68
TBC1D1-201ENST00000261439 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
TBC1D1-201ENST00000261439 TRIM44Q96DX7 344 aaPredicted RBP19.27■□□□□ 0.68
TBC1D1-201ENST00000261439 BECN1Q14457 450 aa19.27■□□□□ 0.68
TBC1D1-201ENST00000261439 RTN4Q9NQC3 1192 aaKnown RBP19.27■□□□□ 0.67
TBC1D1-201ENST00000261439 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
TBC1D1-201ENST00000261439 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms