RNA–Protein interactions for RNA: ENST00000487081.1

KRBOX4-207, Transcript of KRAB box domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KRBOX4, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX4-207ENST00000487081 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
KRBOX4-207ENST00000487081 CCDC180Q9P1Z9 1646 aa34.86■■■■□ 3.17
KRBOX4-207ENST00000487081 ABCC9O60706 1549 aa34.6■■■■□ 3.13
KRBOX4-207ENST00000487081 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
KRBOX4-207ENST00000487081 NACADO15069 1562 aa32.82■■■□□ 2.84
KRBOX4-207ENST00000487081 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
KRBOX4-207ENST00000487081 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
KRBOX4-207ENST00000487081 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
KRBOX4-207ENST00000487081 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
KRBOX4-207ENST00000487081 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
KRBOX4-207ENST00000487081 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
KRBOX4-207ENST00000487081 BICRAQ9NZM4 1560 aa32.21■■■□□ 2.75
KRBOX4-207ENST00000487081 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
KRBOX4-207ENST00000487081 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
KRBOX4-207ENST00000487081 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
KRBOX4-207ENST00000487081 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
KRBOX4-207ENST00000487081 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
KRBOX4-207ENST00000487081 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
KRBOX4-207ENST00000487081 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
KRBOX4-207ENST00000487081 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
KRBOX4-207ENST00000487081 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
KRBOX4-207ENST00000487081 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
KRBOX4-207ENST00000487081 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
KRBOX4-207ENST00000487081 HMGXB3Q12766 1538 aa30.14■■■□□ 2.42
KRBOX4-207ENST00000487081 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
KRBOX4-207ENST00000487081 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
KRBOX4-207ENST00000487081 BAZ1BQ9UIG0 1483 aaKnown RBP29.98■■■□□ 2.39
KRBOX4-207ENST00000487081 NESP48681 1621 aa29.89■■■□□ 2.37
KRBOX4-207ENST00000487081 WIZO95785 1651 aa29.82■■■□□ 2.36
KRBOX4-207ENST00000487081 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
KRBOX4-207ENST00000487081 CUX2O14529 1486 aa29.58■■■□□ 2.33
KRBOX4-207ENST00000487081 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
KRBOX4-207ENST00000487081 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
KRBOX4-207ENST00000487081 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
KRBOX4-207ENST00000487081 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
KRBOX4-207ENST00000487081 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
KRBOX4-207ENST00000487081 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
KRBOX4-207ENST00000487081 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
KRBOX4-207ENST00000487081 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
KRBOX4-207ENST00000487081 CFTRP13569 1480 aa29.16■■■□□ 2.26
KRBOX4-207ENST00000487081 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
KRBOX4-207ENST00000487081 WDR62O43379 1518 aa29.11■■■□□ 2.25
KRBOX4-207ENST00000487081 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
KRBOX4-207ENST00000487081 CEP164Q9UPV0 1460 aa29.05■■■□□ 2.24
KRBOX4-207ENST00000487081 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
KRBOX4-207ENST00000487081 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
KRBOX4-207ENST00000487081 URB2Q14146 1524 aaKnown RBP28.93■■■□□ 2.22
KRBOX4-207ENST00000487081 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
KRBOX4-207ENST00000487081 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
KRBOX4-207ENST00000487081 DNMBPQ6XZF7 1577 aa28.51■■■□□ 2.15
KRBOX4-207ENST00000487081 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
KRBOX4-207ENST00000487081 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
KRBOX4-207ENST00000487081 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
KRBOX4-207ENST00000487081 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
KRBOX4-207ENST00000487081 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
KRBOX4-207ENST00000487081 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
KRBOX4-207ENST00000487081 CUX1P39880 1505 aa28.28■■■□□ 2.12
KRBOX4-207ENST00000487081 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
KRBOX4-207ENST00000487081 AQRO60306 1485 aaKnown RBP eCLIP28.25■■■□□ 2.11
KRBOX4-207ENST00000487081 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
KRBOX4-207ENST00000487081 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
KRBOX4-207ENST00000487081 CHD1O14646 1710 aa28.14■■■□□ 2.1
KRBOX4-207ENST00000487081 SOGA1O94964 1423 aa28.13■■■□□ 2.09
KRBOX4-207ENST00000487081 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
KRBOX4-207ENST00000487081 TDRD9Q8NDG6 1382 aaKnown RBP28.09■■■□□ 2.09
KRBOX4-207ENST00000487081 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
KRBOX4-207ENST00000487081 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
KRBOX4-207ENST00000487081 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
KRBOX4-207ENST00000487081 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
KRBOX4-207ENST00000487081 SNAPC4Q5SXM2 1469 aa27.96■■■□□ 2.07
KRBOX4-207ENST00000487081 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
KRBOX4-207ENST00000487081 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
KRBOX4-207ENST00000487081 PBRM1Q86U86 1689 aa27.91■■■□□ 2.06
KRBOX4-207ENST00000487081 BIVM-ERCC5R4GMW8 1640 aa27.9■■■□□ 2.06
KRBOX4-207ENST00000487081 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
KRBOX4-207ENST00000487081 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
KRBOX4-207ENST00000487081 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
KRBOX4-207ENST00000487081 GRIN2BQ13224 1484 aa27.85■■■□□ 2.05
KRBOX4-207ENST00000487081 FBLN2P98095 1184 aa27.84■■■□□ 2.05
KRBOX4-207ENST00000487081 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
KRBOX4-207ENST00000487081 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
KRBOX4-207ENST00000487081 GAPVD1Q14C86 1478 aa27.81■■■□□ 2.04
KRBOX4-207ENST00000487081 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
KRBOX4-207ENST00000487081 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
KRBOX4-207ENST00000487081 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
KRBOX4-207ENST00000487081 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
KRBOX4-207ENST00000487081 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
KRBOX4-207ENST00000487081 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
KRBOX4-207ENST00000487081 GRIN2AQ12879 1464 aa27.54■■■□□ 2
KRBOX4-207ENST00000487081 CEP170Q5SW79 1584 aa27.53■■■□□ 2
KRBOX4-207ENST00000487081 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
KRBOX4-207ENST00000487081 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
KRBOX4-207ENST00000487081 NUP160Q12769 1436 aa27.45■■□□□ 1.98
KRBOX4-207ENST00000487081 FHAD1B1AJZ9 1412 aa27.44■■□□□ 1.98
KRBOX4-207ENST00000487081 SHROOM2Q13796 1616 aa27.36■■□□□ 1.97
KRBOX4-207ENST00000487081 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.95
KRBOX4-207ENST00000487081 IGF1RP08069 1367 aa27.23■■□□□ 1.95
KRBOX4-207ENST00000487081 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
KRBOX4-207ENST00000487081 CUL7Q14999 1698 aa27.16■■□□□ 1.94
KRBOX4-207ENST00000487081 PRG4Q92954 1404 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms