Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
APOA1P02647 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA1P02647 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA1P02647 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOA1P02647 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.5□□□□□ -0.25
APOA1P02647 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APOA1P02647 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
APOA1P02647 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA1P02647 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA1P02647 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
APOA1P02647 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 AC020658.7-201ENST00000624274 2442 ntBASIC13.49□□□□□ -0.25
APOA1P02647 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.49□□□□□ -0.25
APOA1P02647 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 OR7E14P-202ENST00000530490 1290 ntBASIC13.49□□□□□ -0.25
APOA1P02647 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.49□□□□□ -0.25
APOA1P02647 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
APOA1P02647 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APOA1P02647 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOA1P02647 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOA1P02647 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
APOA1P02647 BEND3P3-201ENST00000611030 2440 ntBASIC13.48□□□□□ -0.25
APOA1P02647 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
APOA1P02647 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.48□□□□□ -0.25
APOA1P02647 RPS8P6-201ENST00000426177 609 ntBASIC13.48□□□□□ -0.25
APOA1P02647 GHSR-202ENST00000427970 912 ntBASIC13.48□□□□□ -0.25
APOA1P02647 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.48□□□□□ -0.25
APOA1P02647 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.48□□□□□ -0.25
APOA1P02647 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms