RNA–Protein interactions for RNA: ENST00000563500.5

PML-210, Transcript of promyelocytic leukemia, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 4,502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-210ENST00000563500 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
PML-210ENST00000563500 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
PML-210ENST00000563500 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
PML-210ENST00000563500 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
PML-210ENST00000563500 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
PML-210ENST00000563500 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
PML-210ENST00000563500 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
PML-210ENST00000563500 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
PML-210ENST00000563500 HRCP23327 699 aa20.31■□□□□ 0.84
PML-210ENST00000563500 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
PML-210ENST00000563500 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
PML-210ENST00000563500 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
PML-210ENST00000563500 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
PML-210ENST00000563500 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
PML-210ENST00000563500 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
PML-210ENST00000563500 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
PML-210ENST00000563500 ZEB1P37275 1124 aaPredicted RBP20.11■□□□□ 0.81
PML-210ENST00000563500 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
PML-210ENST00000563500 APLP2Q06481 763 aa19.99■□□□□ 0.79
PML-210ENST00000563500 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
PML-210ENST00000563500 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.78
PML-210ENST00000563500 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
PML-210ENST00000563500 MYT1Q01538 1121 aa19.68■□□□□ 0.74
PML-210ENST00000563500 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
PML-210ENST00000563500 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
PML-210ENST00000563500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
PML-210ENST00000563500 ABCC9O60706 1549 aa19.48■□□□□ 0.71
PML-210ENST00000563500 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
PML-210ENST00000563500 NEFLP07196 543 aa19.41■□□□□ 0.7
PML-210ENST00000563500 DIEXFQ68CQ4 756 aaKnown RBP19.4■□□□□ 0.7
PML-210ENST00000563500 GTF3C3Q9Y5Q9 886 aa19.39■□□□□ 0.69
PML-210ENST00000563500 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
PML-210ENST00000563500 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
PML-210ENST00000563500 ITGAEP38570 1179 aa19.24■□□□□ 0.67
PML-210ENST00000563500 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
PML-210ENST00000563500 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
PML-210ENST00000563500 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
PML-210ENST00000563500 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
PML-210ENST00000563500 BCANQ96GW7 911 aa19.07■□□□□ 0.64
PML-210ENST00000563500 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
PML-210ENST00000563500 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
PML-210ENST00000563500 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
PML-210ENST00000563500 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
PML-210ENST00000563500 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
PML-210ENST00000563500 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
PML-210ENST00000563500 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
PML-210ENST00000563500 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
PML-210ENST00000563500 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
PML-210ENST00000563500 RTL5Q5HYW3 569 aaPredicted RBP18.59■□□□□ 0.57
PML-210ENST00000563500 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
PML-210ENST00000563500 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
PML-210ENST00000563500 NACADO15069 1562 aa18.51■□□□□ 0.55
PML-210ENST00000563500 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
PML-210ENST00000563500 MIER1Q8N108 512 aa18.46■□□□□ 0.55
PML-210ENST00000563500 FKBP8Q14318 412 aa18.45■□□□□ 0.54
PML-210ENST00000563500 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
PML-210ENST00000563500 ANP32CO43423 234 aa18.42■□□□□ 0.54
PML-210ENST00000563500 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
PML-210ENST00000563500 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
PML-210ENST00000563500 CEP162Q5TB80 1403 aa18.33■□□□□ 0.52
PML-210ENST00000563500 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
PML-210ENST00000563500 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
PML-210ENST00000563500 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
PML-210ENST00000563500 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
PML-210ENST00000563500 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
PML-210ENST00000563500 CLIP1P30622 1438 aa18.24■□□□□ 0.51
PML-210ENST00000563500 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
PML-210ENST00000563500 NPM2Q86SE8 214 aaKnown RBP18.21■□□□□ 0.51
PML-210ENST00000563500 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
PML-210ENST00000563500 SOGA1O94964 1423 aa18.2■□□□□ 0.5
PML-210ENST00000563500 IRX6P78412 446 aaPredicted RBP18.18■□□□□ 0.5
PML-210ENST00000563500 EEA1Q15075 1411 aa18.18■□□□□ 0.5
PML-210ENST00000563500 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
PML-210ENST00000563500 WIZO95785 1651 aa18.17■□□□□ 0.5
PML-210ENST00000563500 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
PML-210ENST00000563500 HNRNPUQ00839 825 aaKnown RBP eCLIP18.16■□□□□ 0.5
PML-210ENST00000563500 NBR1Q14596 966 aa18.16■□□□□ 0.5
PML-210ENST00000563500 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
PML-210ENST00000563500 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
PML-210ENST00000563500 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
PML-210ENST00000563500 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
PML-210ENST00000563500 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.49
PML-210ENST00000563500 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
PML-210ENST00000563500 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.48
PML-210ENST00000563500 ARID3CA6NKF2 412 aa18.07■□□□□ 0.48
PML-210ENST00000563500 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
PML-210ENST00000563500 ANP32EQ9BTT0 268 aa18.02■□□□□ 0.48
PML-210ENST00000563500 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
PML-210ENST00000563500 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
PML-210ENST00000563500 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
PML-210ENST00000563500 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
PML-210ENST00000563500 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
PML-210ENST00000563500 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
PML-210ENST00000563500 FBLN2P98095 1184 aa17.9■□□□□ 0.46
PML-210ENST00000563500 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
PML-210ENST00000563500 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
PML-210ENST00000563500 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
PML-210ENST00000563500 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
PML-210ENST00000563500 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
PML-210ENST00000563500 CHIC2Q9UKJ5 165 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms