Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE8Q86YQ8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 RPL13AP25-201ENST00000484130 612 ntBASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AC104596.2-201ENST00000512793 793 ntBASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AJ011932.1-201ENST00000621707 465 ntBASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE8Q86YQ8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC002472.2-201ENST00000442739 958 ntBASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 TMEM261P1-201ENST00000604899 340 ntBASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CPNE8Q86YQ8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE8Q86YQ8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE8Q86YQ8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE8Q86YQ8 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE8Q86YQ8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms