RNA–Protein interactions for RNA: ENST00000535233.6

C1R-201, Transcript of complement C1r, humanhuman

TSL 2 BASIC

Gene C1R, Length 2,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-201ENST00000535233 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
C1R-201ENST00000535233 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
C1R-201ENST00000535233 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
C1R-201ENST00000535233 HRCP23327 699 aa24.64■■□□□ 1.54
C1R-201ENST00000535233 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
C1R-201ENST00000535233 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
C1R-201ENST00000535233 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
C1R-201ENST00000535233 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
C1R-201ENST00000535233 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
C1R-201ENST00000535233 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
C1R-201ENST00000535233 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
C1R-201ENST00000535233 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
C1R-201ENST00000535233 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
C1R-201ENST00000535233 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
C1R-201ENST00000535233 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
C1R-201ENST00000535233 ABCC9O60706 1549 aa23.26■■□□□ 1.31
C1R-201ENST00000535233 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
C1R-201ENST00000535233 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
C1R-201ENST00000535233 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
C1R-201ENST00000535233 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
C1R-201ENST00000535233 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
C1R-201ENST00000535233 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
C1R-201ENST00000535233 SCRIBQ14160 1630 aa22.89■■□□□ 1.26
C1R-201ENST00000535233 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
C1R-201ENST00000535233 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
C1R-201ENST00000535233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
C1R-201ENST00000535233 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
C1R-201ENST00000535233 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
C1R-201ENST00000535233 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
C1R-201ENST00000535233 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
C1R-201ENST00000535233 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
C1R-201ENST00000535233 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
C1R-201ENST00000535233 GTF3C3Q9Y5Q9 886 aa22.4■■□□□ 1.18
C1R-201ENST00000535233 WIZO95785 1651 aa22.4■■□□□ 1.18
C1R-201ENST00000535233 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
C1R-201ENST00000535233 NACADO15069 1562 aa22.32■■□□□ 1.16
C1R-201ENST00000535233 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
C1R-201ENST00000535233 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
C1R-201ENST00000535233 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
C1R-201ENST00000535233 MYT1Q01538 1121 aa22.21■■□□□ 1.15
C1R-201ENST00000535233 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
C1R-201ENST00000535233 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
C1R-201ENST00000535233 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
C1R-201ENST00000535233 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
C1R-201ENST00000535233 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
C1R-201ENST00000535233 SOGA1O94964 1423 aa22.06■■□□□ 1.12
C1R-201ENST00000535233 TOP2AP11388 1531 aaKnown RBP22.05■■□□□ 1.12
C1R-201ENST00000535233 EEA1Q15075 1411 aa21.99■■□□□ 1.11
C1R-201ENST00000535233 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
C1R-201ENST00000535233 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
C1R-201ENST00000535233 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
C1R-201ENST00000535233 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
C1R-201ENST00000535233 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
C1R-201ENST00000535233 MIER1Q8N108 512 aa21.91■■□□□ 1.1
C1R-201ENST00000535233 GOLGA3Q08378 1498 aa21.89■■□□□ 1.09
C1R-201ENST00000535233 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
C1R-201ENST00000535233 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
C1R-201ENST00000535233 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
C1R-201ENST00000535233 CLIP1P30622 1438 aa21.67■■□□□ 1.06
C1R-201ENST00000535233 VPS8Q8N3P4 1428 aa21.64■■□□□ 1.06
C1R-201ENST00000535233 KIF21BO75037 1637 aa21.64■■□□□ 1.05
C1R-201ENST00000535233 APLP2Q06481 763 aa21.58■■□□□ 1.05
C1R-201ENST00000535233 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
C1R-201ENST00000535233 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
C1R-201ENST00000535233 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
C1R-201ENST00000535233 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
C1R-201ENST00000535233 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
C1R-201ENST00000535233 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
C1R-201ENST00000535233 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
C1R-201ENST00000535233 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
C1R-201ENST00000535233 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
C1R-201ENST00000535233 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
C1R-201ENST00000535233 BICRAQ9NZM4 1560 aa21.27■■□□□ 1
C1R-201ENST00000535233 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
C1R-201ENST00000535233 KANK4Q5T7N3 995 aaPredicted RBP21.26■□□□□ 0.99
C1R-201ENST00000535233 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
C1R-201ENST00000535233 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
C1R-201ENST00000535233 RRBP1Q9P2E9 1410 aaKnown RBP21.22■□□□□ 0.99
C1R-201ENST00000535233 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
C1R-201ENST00000535233 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.99
C1R-201ENST00000535233 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
C1R-201ENST00000535233 CUX2O14529 1486 aa21.19■□□□□ 0.98
C1R-201ENST00000535233 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
C1R-201ENST00000535233 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
C1R-201ENST00000535233 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
C1R-201ENST00000535233 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
C1R-201ENST00000535233 ITGAEP38570 1179 aa21.02■□□□□ 0.96
C1R-201ENST00000535233 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
C1R-201ENST00000535233 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
C1R-201ENST00000535233 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
C1R-201ENST00000535233 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
C1R-201ENST00000535233 BCANQ96GW7 911 aa20.97■□□□□ 0.95
C1R-201ENST00000535233 FKBP8Q14318 412 aa20.94■□□□□ 0.94
C1R-201ENST00000535233 CUX1P39880 1505 aa20.92■□□□□ 0.94
C1R-201ENST00000535233 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
C1R-201ENST00000535233 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
C1R-201ENST00000535233 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
C1R-201ENST00000535233 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
C1R-201ENST00000535233 SIN3AQ96ST3 1273 aa20.84■□□□□ 0.93
C1R-201ENST00000535233 MAP3K1Q13233 1512 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms