Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
POLR2CP19387 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2CP19387 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 FAM21FP-201ENST00000426241 1131 ntBASIC14.64□□□□□ -0.07
POLR2CP19387 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2CP19387 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR2CP19387 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
POLR2CP19387 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 AL354989.2-201ENST00000435838 1540 ntBASIC14.64□□□□□ -0.07
POLR2CP19387 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2CP19387 AP002414.2-201ENST00000591780 3365 ntBASIC14.64□□□□□ -0.07
POLR2CP19387 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
POLR2CP19387 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR2CP19387 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
POLR2CP19387 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR2CP19387 AC013268.4-201ENST00000637413 2228 ntBASIC14.64□□□□□ -0.07
POLR2CP19387 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2CP19387 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2CP19387 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
POLR2CP19387 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
POLR2CP19387 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 AC245100.3-201ENST00000441281 285 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 YBX1P6-201ENST00000442962 1002 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2CP19387 AC023310.1-201ENST00000554836 735 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 DUX4L47-201ENST00000566374 394 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.63□□□□□ -0.07
POLR2CP19387 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.63□□□□□ -0.07
POLR2CP19387 AC006453.4-201ENST00000636949 1252 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 AC008687.7-202ENST00000637404 953 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 MROH4P-201ENST00000431302 1578 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 AL109954.1-202ENST00000564051 2148 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2CP19387 AHCYP2-201ENST00000430630 1300 ntBASIC14.63□□□□□ -0.07
POLR2CP19387 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
POLR2CP19387 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2CP19387 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2CP19387 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
POLR2CP19387 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2CP19387 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
POLR2CP19387 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
POLR2CP19387 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
POLR2CP19387 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 REXO1L2P-201ENST00000425429 2069 ntBASIC14.62□□□□□ -0.07
POLR2CP19387 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2CP19387 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
POLR2CP19387 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
POLR2CP19387 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2CP19387 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms