RNA–Protein interactions for RNA: ENST00000466681.1

MALSU1-202, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MALSU1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-202ENST00000466681 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
MALSU1-202ENST00000466681 HRCP23327 699 aa25.43■■□□□ 1.66
MALSU1-202ENST00000466681 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
MALSU1-202ENST00000466681 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
MALSU1-202ENST00000466681 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
MALSU1-202ENST00000466681 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
MALSU1-202ENST00000466681 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
MALSU1-202ENST00000466681 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
MALSU1-202ENST00000466681 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
MALSU1-202ENST00000466681 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
MALSU1-202ENST00000466681 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
MALSU1-202ENST00000466681 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
MALSU1-202ENST00000466681 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
MALSU1-202ENST00000466681 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.43
MALSU1-202ENST00000466681 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
MALSU1-202ENST00000466681 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
MALSU1-202ENST00000466681 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
MALSU1-202ENST00000466681 MYT1Q01538 1121 aa23.66■■□□□ 1.38
MALSU1-202ENST00000466681 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
MALSU1-202ENST00000466681 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
MALSU1-202ENST00000466681 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
MALSU1-202ENST00000466681 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
MALSU1-202ENST00000466681 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
MALSU1-202ENST00000466681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
MALSU1-202ENST00000466681 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.32
MALSU1-202ENST00000466681 CCER1Q8TC90 406 aaPredicted RBP23.25■■□□□ 1.31
MALSU1-202ENST00000466681 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
MALSU1-202ENST00000466681 DIEXFQ68CQ4 756 aaKnown RBP23.2■■□□□ 1.3
MALSU1-202ENST00000466681 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
MALSU1-202ENST00000466681 ABCC9O60706 1549 aa23.15■■□□□ 1.3
MALSU1-202ENST00000466681 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
MALSU1-202ENST00000466681 MIER1Q8N108 512 aa22.64■■□□□ 1.21
MALSU1-202ENST00000466681 NACADO15069 1562 aa22.6■■□□□ 1.21
MALSU1-202ENST00000466681 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
MALSU1-202ENST00000466681 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
MALSU1-202ENST00000466681 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
MALSU1-202ENST00000466681 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
MALSU1-202ENST00000466681 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
MALSU1-202ENST00000466681 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
MALSU1-202ENST00000466681 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
MALSU1-202ENST00000466681 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
MALSU1-202ENST00000466681 BCANQ96GW7 911 aa22.2■■□□□ 1.14
MALSU1-202ENST00000466681 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
MALSU1-202ENST00000466681 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
MALSU1-202ENST00000466681 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.12
MALSU1-202ENST00000466681 RANGAP1P46060 587 aaPredicted RBP21.98■■□□□ 1.11
MALSU1-202ENST00000466681 UNC13AQ9UPW8 1703 aa21.95■■□□□ 1.1
MALSU1-202ENST00000466681 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
MALSU1-202ENST00000466681 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
MALSU1-202ENST00000466681 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
MALSU1-202ENST00000466681 FKBP8Q14318 412 aa21.82■■□□□ 1.08
MALSU1-202ENST00000466681 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
MALSU1-202ENST00000466681 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
MALSU1-202ENST00000466681 ITGAEP38570 1179 aa21.8■■□□□ 1.08
MALSU1-202ENST00000466681 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
MALSU1-202ENST00000466681 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.074e-6■■■■□ 19.5
MALSU1-202ENST00000466681 SOGA1O94964 1423 aa21.7■■□□□ 1.06
MALSU1-202ENST00000466681 APLP2Q06481 763 aa21.69■■□□□ 1.06
MALSU1-202ENST00000466681 RBM19Q9Y4C8 960 aaKnown RBP21.69■■□□□ 1.06
MALSU1-202ENST00000466681 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
MALSU1-202ENST00000466681 ABCC8Q09428 1581 aa21.64■■□□□ 1.06
MALSU1-202ENST00000466681 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
MALSU1-202ENST00000466681 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
MALSU1-202ENST00000466681 RUSC2Q8N2Y8 1516 aa21.57■■□□□ 1.04
MALSU1-202ENST00000466681 NEFLP07196 543 aa21.56■■□□□ 1.04
MALSU1-202ENST00000466681 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
MALSU1-202ENST00000466681 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
MALSU1-202ENST00000466681 ERICH6Q7L0X2 663 aa21.53■■□□□ 1.04
MALSU1-202ENST00000466681 WIZO95785 1651 aa21.53■■□□□ 1.04
MALSU1-202ENST00000466681 MSH5O43196 834 aa21.5■■□□□ 1.03
MALSU1-202ENST00000466681 PRKCSHP14314 528 aaPredicted RBP21.5■■□□□ 1.03
MALSU1-202ENST00000466681 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
MALSU1-202ENST00000466681 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
MALSU1-202ENST00000466681 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
MALSU1-202ENST00000466681 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
MALSU1-202ENST00000466681 DHX57Q6P158 1386 aaKnown RBP21.38■■□□□ 1.01
MALSU1-202ENST00000466681 CLIP1P30622 1438 aa21.33■■□□□ 1.01
MALSU1-202ENST00000466681 GOLGA3Q08378 1498 aa21.31■■□□□ 1
MALSU1-202ENST00000466681 NBR1Q14596 966 aa21.22■□□□□ 0.99
MALSU1-202ENST00000466681 DEKP35659 375 aaKnown RBP21.21■□□□□ 0.99
MALSU1-202ENST00000466681 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
MALSU1-202ENST00000466681 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
MALSU1-202ENST00000466681 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
MALSU1-202ENST00000466681 VPS8Q8N3P4 1428 aa21.17■□□□□ 0.98
MALSU1-202ENST00000466681 ANO8Q9HCE9 1232 aaPredicted RBP21.16■□□□□ 0.98
MALSU1-202ENST00000466681 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
MALSU1-202ENST00000466681 SIN3AQ96ST3 1273 aa21.15■□□□□ 0.98
MALSU1-202ENST00000466681 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.97
MALSU1-202ENST00000466681 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
MALSU1-202ENST00000466681 ANP32CO43423 234 aa21.11■□□□□ 0.97
MALSU1-202ENST00000466681 EEA1Q15075 1411 aa21.11■□□□□ 0.97
MALSU1-202ENST00000466681 HNRNPUQ00839 825 aaKnown RBP eCLIP21.07■□□□□ 0.96
MALSU1-202ENST00000466681 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
MALSU1-202ENST00000466681 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
MALSU1-202ENST00000466681 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
MALSU1-202ENST00000466681 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
MALSU1-202ENST00000466681 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
MALSU1-202ENST00000466681 RTN4Q9NQC3 1192 aaKnown RBP21.01■□□□□ 0.95
MALSU1-202ENST00000466681 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
MALSU1-202ENST00000466681 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms