RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
RAB3IP-204ENST00000378815 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
RAB3IP-204ENST00000378815 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
RAB3IP-204ENST00000378815 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
RAB3IP-204ENST00000378815 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
RAB3IP-204ENST00000378815 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
RAB3IP-204ENST00000378815 ABCC9O60706 1549 aa28.1■■■□□ 2.09
RAB3IP-204ENST00000378815 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
RAB3IP-204ENST00000378815 NACADO15069 1562 aa27.8■■■□□ 2.04
RAB3IP-204ENST00000378815 SCRIBQ14160 1630 aa27.53■■■□□ 2
RAB3IP-204ENST00000378815 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
RAB3IP-204ENST00000378815 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
RAB3IP-204ENST00000378815 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
RAB3IP-204ENST00000378815 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
RAB3IP-204ENST00000378815 CECR2Q9BXF3 1484 aa26.76■■□□□ 1.87
RAB3IP-204ENST00000378815 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
RAB3IP-204ENST00000378815 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
RAB3IP-204ENST00000378815 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
RAB3IP-204ENST00000378815 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
RAB3IP-204ENST00000378815 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
RAB3IP-204ENST00000378815 WIZO95785 1651 aa26.39■■□□□ 1.82
RAB3IP-204ENST00000378815 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
RAB3IP-204ENST00000378815 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
RAB3IP-204ENST00000378815 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
RAB3IP-204ENST00000378815 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
RAB3IP-204ENST00000378815 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
RAB3IP-204ENST00000378815 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
RAB3IP-204ENST00000378815 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
RAB3IP-204ENST00000378815 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
RAB3IP-204ENST00000378815 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
RAB3IP-204ENST00000378815 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
RAB3IP-204ENST00000378815 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
RAB3IP-204ENST00000378815 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
RAB3IP-204ENST00000378815 ABCC8Q09428 1581 aa25.4■■□□□ 1.66
RAB3IP-204ENST00000378815 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
RAB3IP-204ENST00000378815 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
RAB3IP-204ENST00000378815 CFTRP13569 1480 aa25.18■■□□□ 1.62
RAB3IP-204ENST00000378815 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
RAB3IP-204ENST00000378815 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
RAB3IP-204ENST00000378815 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
RAB3IP-204ENST00000378815 SOGA1O94964 1423 aa25■■□□□ 1.59
RAB3IP-204ENST00000378815 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
RAB3IP-204ENST00000378815 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
RAB3IP-204ENST00000378815 EEA1Q15075 1411 aa24.96■■□□□ 1.59
RAB3IP-204ENST00000378815 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
RAB3IP-204ENST00000378815 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
RAB3IP-204ENST00000378815 CUX1P39880 1505 aa24.87■■□□□ 1.57
RAB3IP-204ENST00000378815 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
RAB3IP-204ENST00000378815 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
RAB3IP-204ENST00000378815 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
RAB3IP-204ENST00000378815 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
RAB3IP-204ENST00000378815 NESP48681 1621 aa24.75■■□□□ 1.55
RAB3IP-204ENST00000378815 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
RAB3IP-204ENST00000378815 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
RAB3IP-204ENST00000378815 KIF21BO75037 1637 aa24.62■■□□□ 1.53
RAB3IP-204ENST00000378815 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
RAB3IP-204ENST00000378815 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
RAB3IP-204ENST00000378815 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
RAB3IP-204ENST00000378815 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
RAB3IP-204ENST00000378815 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
RAB3IP-204ENST00000378815 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
RAB3IP-204ENST00000378815 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
RAB3IP-204ENST00000378815 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
RAB3IP-204ENST00000378815 CEP162Q5TB80 1403 aa24.5■■□□□ 1.51
RAB3IP-204ENST00000378815 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
RAB3IP-204ENST00000378815 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
RAB3IP-204ENST00000378815 CUX2O14529 1486 aa24.45■■□□□ 1.5
RAB3IP-204ENST00000378815 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
RAB3IP-204ENST00000378815 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
RAB3IP-204ENST00000378815 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
RAB3IP-204ENST00000378815 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
RAB3IP-204ENST00000378815 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
RAB3IP-204ENST00000378815 IGF1RP08069 1367 aa24.35■■□□□ 1.49
RAB3IP-204ENST00000378815 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
RAB3IP-204ENST00000378815 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
RAB3IP-204ENST00000378815 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
RAB3IP-204ENST00000378815 CLIP1P30622 1438 aa24.25■■□□□ 1.47
RAB3IP-204ENST00000378815 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
RAB3IP-204ENST00000378815 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
RAB3IP-204ENST00000378815 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
RAB3IP-204ENST00000378815 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
RAB3IP-204ENST00000378815 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
RAB3IP-204ENST00000378815 WDR62O43379 1518 aa24.1■■□□□ 1.45
RAB3IP-204ENST00000378815 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
RAB3IP-204ENST00000378815 CUL7Q14999 1698 aa24.08■■□□□ 1.44
RAB3IP-204ENST00000378815 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
RAB3IP-204ENST00000378815 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
RAB3IP-204ENST00000378815 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
RAB3IP-204ENST00000378815 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
RAB3IP-204ENST00000378815 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
RAB3IP-204ENST00000378815 ARAP1Q96P48 1450 aa24■■□□□ 1.43
RAB3IP-204ENST00000378815 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
RAB3IP-204ENST00000378815 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
RAB3IP-204ENST00000378815 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.43
RAB3IP-204ENST00000378815 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
RAB3IP-204ENST00000378815 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
RAB3IP-204ENST00000378815 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
RAB3IP-204ENST00000378815 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
RAB3IP-204ENST00000378815 HRCP23327 699 aa23.82■■□□□ 1.4
RAB3IP-204ENST00000378815 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms