RNA–Protein interactions for RNA: ENST00000554540.1

AL163974.1-201, humanhuman

TSL 5 BASIC

Gene AL163974.1, Length 466 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL163974.1-201ENST00000554540 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
AL163974.1-201ENST00000554540 ABCC9O60706 1549 aa34.03■■■■□ 3.04
AL163974.1-201ENST00000554540 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
AL163974.1-201ENST00000554540 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
AL163974.1-201ENST00000554540 DNAJC5BQ9UF47 199 aa32.19■■■□□ 2.74
AL163974.1-201ENST00000554540 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
AL163974.1-201ENST00000554540 NACADO15069 1562 aa32.04■■■□□ 2.72
AL163974.1-201ENST00000554540 PABPN1Q86U42 306 aaKnown RBP eCLIP31.79■■■□□ 2.68
AL163974.1-201ENST00000554540 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
AL163974.1-201ENST00000554540 UNC13AQ9UPW8 1703 aa31.3■■■□□ 2.6
AL163974.1-201ENST00000554540 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
AL163974.1-201ENST00000554540 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
AL163974.1-201ENST00000554540 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
AL163974.1-201ENST00000554540 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
AL163974.1-201ENST00000554540 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
AL163974.1-201ENST00000554540 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
AL163974.1-201ENST00000554540 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
AL163974.1-201ENST00000554540 EIF4G1Q04637 1599 aaKnown RBP30.56■■■□□ 2.48
AL163974.1-201ENST00000554540 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
AL163974.1-201ENST00000554540 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
AL163974.1-201ENST00000554540 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
AL163974.1-201ENST00000554540 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
AL163974.1-201ENST00000554540 CUX2O14529 1486 aa29.42■■■□□ 2.3
AL163974.1-201ENST00000554540 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
AL163974.1-201ENST00000554540 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
AL163974.1-201ENST00000554540 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
AL163974.1-201ENST00000554540 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
AL163974.1-201ENST00000554540 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
AL163974.1-201ENST00000554540 NESP48681 1621 aa29.16■■■□□ 2.26
AL163974.1-201ENST00000554540 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
AL163974.1-201ENST00000554540 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
AL163974.1-201ENST00000554540 LAMC3Q9Y6N6 1575 aa28.91■■■□□ 2.22
AL163974.1-201ENST00000554540 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
AL163974.1-201ENST00000554540 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
AL163974.1-201ENST00000554540 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
AL163974.1-201ENST00000554540 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
AL163974.1-201ENST00000554540 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
AL163974.1-201ENST00000554540 WIZO95785 1651 aa28.54■■■□□ 2.16
AL163974.1-201ENST00000554540 WDR62O43379 1518 aa28.43■■■□□ 2.14
AL163974.1-201ENST00000554540 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
AL163974.1-201ENST00000554540 RSF1Q96T23 1441 aaPredicted RBP28.4■■■□□ 2.14
AL163974.1-201ENST00000554540 FANCD2Q9BXW9 1451 aa28.39■■■□□ 2.13
AL163974.1-201ENST00000554540 CFTRP13569 1480 aa28.36■■■□□ 2.13
AL163974.1-201ENST00000554540 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
AL163974.1-201ENST00000554540 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
AL163974.1-201ENST00000554540 OSCARQ8IYS5 282 aa28.22■■■□□ 2.11
AL163974.1-201ENST00000554540 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
AL163974.1-201ENST00000554540 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
AL163974.1-201ENST00000554540 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
AL163974.1-201ENST00000554540 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
AL163974.1-201ENST00000554540 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
AL163974.1-201ENST00000554540 TOPBP1Q92547 1522 aa27.8■■■□□ 2.04
AL163974.1-201ENST00000554540 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
AL163974.1-201ENST00000554540 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
AL163974.1-201ENST00000554540 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.01
AL163974.1-201ENST00000554540 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
AL163974.1-201ENST00000554540 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
AL163974.1-201ENST00000554540 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
AL163974.1-201ENST00000554540 FBLN2P98095 1184 aa27.57■■■□□ 2
AL163974.1-201ENST00000554540 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
AL163974.1-201ENST00000554540 ARHGEF11O15085 1522 aa27.55■■■□□ 2
AL163974.1-201ENST00000554540 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
AL163974.1-201ENST00000554540 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
AL163974.1-201ENST00000554540 SOGA1O94964 1423 aa27.48■■□□□ 1.99
AL163974.1-201ENST00000554540 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
AL163974.1-201ENST00000554540 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
AL163974.1-201ENST00000554540 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
AL163974.1-201ENST00000554540 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
AL163974.1-201ENST00000554540 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
AL163974.1-201ENST00000554540 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
AL163974.1-201ENST00000554540 CHD1O14646 1710 aa27.29■■□□□ 1.96
AL163974.1-201ENST00000554540 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
AL163974.1-201ENST00000554540 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
AL163974.1-201ENST00000554540 CUX1P39880 1505 aa27.22■■□□□ 1.95
AL163974.1-201ENST00000554540 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
AL163974.1-201ENST00000554540 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
AL163974.1-201ENST00000554540 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
AL163974.1-201ENST00000554540 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.94
AL163974.1-201ENST00000554540 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
AL163974.1-201ENST00000554540 SYNJ1O43426 1573 aa27.1■■□□□ 1.93
AL163974.1-201ENST00000554540 CLASP1Q7Z460 1538 aa27.09■■□□□ 1.93
AL163974.1-201ENST00000554540 GAPVD1Q14C86 1478 aa27.08■■□□□ 1.93
AL163974.1-201ENST00000554540 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
AL163974.1-201ENST00000554540 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
AL163974.1-201ENST00000554540 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
AL163974.1-201ENST00000554540 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
AL163974.1-201ENST00000554540 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
AL163974.1-201ENST00000554540 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
AL163974.1-201ENST00000554540 NUP160Q12769 1436 aa26.75■■□□□ 1.87
AL163974.1-201ENST00000554540 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
AL163974.1-201ENST00000554540 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
AL163974.1-201ENST00000554540 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
AL163974.1-201ENST00000554540 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
AL163974.1-201ENST00000554540 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
AL163974.1-201ENST00000554540 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
AL163974.1-201ENST00000554540 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
AL163974.1-201ENST00000554540 JPH4Q96JJ6 628 aa26.64■■□□□ 1.86
AL163974.1-201ENST00000554540 PRG4Q92954 1404 aaPredicted RBP26.56■■□□□ 1.84
AL163974.1-201ENST00000554540 SHROOM2Q13796 1616 aa26.53■■□□□ 1.84
AL163974.1-201ENST00000554540 NPM1P06748 294 aaKnown RBP eCLIP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms