Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRTM1Q86UE6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AL359183.1-201ENST00000623796 2132 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AC016397.2-201ENST00000624848 1985 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 ELL2P1-201ENST00000413990 1906 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 SERBP1P3-201ENST00000459980 809 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AL589739.1-201ENST00000607720 493 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AL513210.1-201ENST00000629608 234 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AGGF1P1-201ENST00000509500 2073 ntBASIC13.16□□□□□ -0.3
LRRTM1Q86UE6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
LRRTM1Q86UE6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms