Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.11■■□□□ 1.61
LNX1Q8TBB1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LNX1Q8TBB1 LINC00543-201ENST00000567234 1845 ntBASIC25.11■■□□□ 1.61
LNX1Q8TBB1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LNX1Q8TBB1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
LNX1Q8TBB1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
LNX1Q8TBB1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.1■■□□□ 1.61
LNX1Q8TBB1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LNX1Q8TBB1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LNX1Q8TBB1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LNX1Q8TBB1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LNX1Q8TBB1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
LNX1Q8TBB1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.08■■□□□ 1.61
LNX1Q8TBB1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LNX1Q8TBB1 AC019069.1-201ENST00000610008 1333 ntBASIC25.08■■□□□ 1.6
LNX1Q8TBB1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
LNX1Q8TBB1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
LNX1Q8TBB1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
LNX1Q8TBB1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LNX1Q8TBB1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LNX1Q8TBB1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LNX1Q8TBB1 AF131216.4-201ENST00000638924 1588 ntBASIC25.07■■□□□ 1.6
LNX1Q8TBB1 AC010997.5-201ENST00000609182 354 ntBASIC25.07■■□□□ 1.6
LNX1Q8TBB1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LNX1Q8TBB1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LNX1Q8TBB1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.05■■□□□ 1.6
LNX1Q8TBB1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
LNX1Q8TBB1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.03■■□□□ 1.6
LNX1Q8TBB1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LNX1Q8TBB1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 MTDHP2-201ENST00000601468 714 ntBASIC25.02■■□□□ 1.6
LNX1Q8TBB1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LNX1Q8TBB1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 MIR6724-1-201ENST00000616420 92 ntBASIC25.01■■□□□ 1.59
LNX1Q8TBB1 MIR6724-2-201ENST00000616483 92 ntBASIC25.01■■□□□ 1.59
LNX1Q8TBB1 MIR6724-4-201ENST00000617390 92 ntBASIC25.01■■□□□ 1.59
LNX1Q8TBB1 MIR6724-3-201ENST00000622482 92 ntBASIC25.01■■□□□ 1.59
LNX1Q8TBB1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LNX1Q8TBB1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
LNX1Q8TBB1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25■■□□□ 1.59
LNX1Q8TBB1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25■■□□□ 1.59
LNX1Q8TBB1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms