Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.35□□□□□ -0.27
UBCP0CG48 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.35□□□□□ -0.27
UBCP0CG48 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBCP0CG48 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
UBCP0CG48 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBCP0CG48 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.34□□□□□ -0.27
UBCP0CG48 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.34□□□□□ -0.27
UBCP0CG48 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.34□□□□□ -0.27
UBCP0CG48 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.34□□□□□ -0.27
UBCP0CG48 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.34□□□□□ -0.27
UBCP0CG48 AL138828.2-201ENST00000615812 383 ntBASIC13.34□□□□□ -0.27
UBCP0CG48 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.34□□□□□ -0.27
UBCP0CG48 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 AC004461.2-201ENST00000629517 803 ntBASIC13.34□□□□□ -0.27
UBCP0CG48 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UBCP0CG48 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.34□□□□□ -0.27
UBCP0CG48 AL109936.8-201ENST00000641772 604 ntBASIC13.34□□□□□ -0.27
UBCP0CG48 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
UBCP0CG48 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UBCP0CG48 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UBCP0CG48 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UBCP0CG48 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
UBCP0CG48 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.33□□□□□ -0.27
UBCP0CG48 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.33□□□□□ -0.27
UBCP0CG48 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
UBCP0CG48 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.33□□□□□ -0.28
UBCP0CG48 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.33□□□□□ -0.28
UBCP0CG48 AP006288.1-201ENST00000446065 395 ntBASIC13.33□□□□□ -0.28
UBCP0CG48 AC004066.1-201ENST00000502488 802 ntBASIC13.33□□□□□ -0.28
UBCP0CG48 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.33□□□□□ -0.28
UBCP0CG48 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.33□□□□□ -0.28
UBCP0CG48 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.33□□□□□ -0.28
UBCP0CG48 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.33□□□□□ -0.28
UBCP0CG48 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
UBCP0CG48 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.33□□□□□ -0.28
UBCP0CG48 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.33□□□□□ -0.28
UBCP0CG48 AC073592.8-201ENST00000624126 511 ntBASIC13.33□□□□□ -0.28
UBCP0CG48 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.33□□□□□ -0.28
UBCP0CG48 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
UBCP0CG48 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.33□□□□□ -0.28
UBCP0CG48 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UBCP0CG48 AL122018.1-201ENST00000446607 2310 ntBASIC13.33□□□□□ -0.28
UBCP0CG48 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
UBCP0CG48 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBCP0CG48 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms