RNA–Protein interactions for RNA: ENST00000421052.5

RAD18-205, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene RAD18, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-205ENST00000421052 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
RAD18-205ENST00000421052 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
RAD18-205ENST00000421052 ABCC9O60706 1549 aa33.18■■■□□ 2.9
RAD18-205ENST00000421052 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
RAD18-205ENST00000421052 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
RAD18-205ENST00000421052 AEBP2Q6ZN18 517 aaPredicted RBP31.92■■■□□ 2.7
RAD18-205ENST00000421052 NACADO15069 1562 aa31.85■■■□□ 2.69
RAD18-205ENST00000421052 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RAD18-205ENST00000421052 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
RAD18-205ENST00000421052 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
RAD18-205ENST00000421052 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
RAD18-205ENST00000421052 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
RAD18-205ENST00000421052 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
RAD18-205ENST00000421052 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
RAD18-205ENST00000421052 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
RAD18-205ENST00000421052 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
RAD18-205ENST00000421052 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
RAD18-205ENST00000421052 EIF4G1Q04637 1599 aaKnown RBP30.12■■■□□ 2.41
RAD18-205ENST00000421052 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
RAD18-205ENST00000421052 CECR2Q9BXF3 1484 aa29.96■■■□□ 2.39
RAD18-205ENST00000421052 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
RAD18-205ENST00000421052 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
RAD18-205ENST00000421052 MROH2BQ7Z745 1585 aa29.63■■■□□ 2.33
RAD18-205ENST00000421052 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
RAD18-205ENST00000421052 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
RAD18-205ENST00000421052 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
RAD18-205ENST00000421052 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
RAD18-205ENST00000421052 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
RAD18-205ENST00000421052 WIZO95785 1651 aa29.32■■■□□ 2.28
RAD18-205ENST00000421052 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
RAD18-205ENST00000421052 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
RAD18-205ENST00000421052 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
RAD18-205ENST00000421052 NESP48681 1621 aa28.81■■■□□ 2.2
RAD18-205ENST00000421052 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
RAD18-205ENST00000421052 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
RAD18-205ENST00000421052 CADPSQ9ULU8 1353 aa28.6■■■□□ 2.17
RAD18-205ENST00000421052 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
RAD18-205ENST00000421052 ERCC6Q03468 1493 aa28.49■■■□□ 2.15
RAD18-205ENST00000421052 CFTRP13569 1480 aa28.46■■■□□ 2.15
RAD18-205ENST00000421052 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
RAD18-205ENST00000421052 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
RAD18-205ENST00000421052 FANCD2Q9BXW9 1451 aa28.29■■■□□ 2.12
RAD18-205ENST00000421052 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
RAD18-205ENST00000421052 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
RAD18-205ENST00000421052 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
RAD18-205ENST00000421052 MRC2Q9UBG0 1479 aa28.14■■■□□ 2.09
RAD18-205ENST00000421052 CUX2O14529 1486 aa28.07■■■□□ 2.08
RAD18-205ENST00000421052 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
RAD18-205ENST00000421052 WDR62O43379 1518 aa28.03■■■□□ 2.08
RAD18-205ENST00000421052 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
RAD18-205ENST00000421052 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
RAD18-205ENST00000421052 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
RAD18-205ENST00000421052 CUX1P39880 1505 aa27.77■■■□□ 2.04
RAD18-205ENST00000421052 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
RAD18-205ENST00000421052 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
RAD18-205ENST00000421052 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
RAD18-205ENST00000421052 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
RAD18-205ENST00000421052 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
RAD18-205ENST00000421052 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
RAD18-205ENST00000421052 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
RAD18-205ENST00000421052 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
RAD18-205ENST00000421052 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
RAD18-205ENST00000421052 SOGA1O94964 1423 aa27.53■■■□□ 2
RAD18-205ENST00000421052 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
RAD18-205ENST00000421052 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
RAD18-205ENST00000421052 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.982e-6■■■□□ 16.1
RAD18-205ENST00000421052 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
RAD18-205ENST00000421052 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
RAD18-205ENST00000421052 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
RAD18-205ENST00000421052 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
RAD18-205ENST00000421052 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
RAD18-205ENST00000421052 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
RAD18-205ENST00000421052 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.95
RAD18-205ENST00000421052 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
RAD18-205ENST00000421052 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
RAD18-205ENST00000421052 PBRM1Q86U86 1689 aa27.14■■□□□ 1.93
RAD18-205ENST00000421052 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
RAD18-205ENST00000421052 DNAJC5Q9H3Z4 198 aa27.07■■□□□ 1.92
RAD18-205ENST00000421052 FBLN2P98095 1184 aa27.05■■□□□ 1.92
RAD18-205ENST00000421052 CHD1O14646 1710 aa27.04■■□□□ 1.92
RAD18-205ENST00000421052 MAGI1Q96QZ7 1491 aaPredicted RBP27.02■■□□□ 1.92
RAD18-205ENST00000421052 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
RAD18-205ENST00000421052 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
RAD18-205ENST00000421052 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
RAD18-205ENST00000421052 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
RAD18-205ENST00000421052 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
RAD18-205ENST00000421052 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
RAD18-205ENST00000421052 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
RAD18-205ENST00000421052 IGF1RP08069 1367 aa26.92■■□□□ 1.9
RAD18-205ENST00000421052 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
RAD18-205ENST00000421052 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
RAD18-205ENST00000421052 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
RAD18-205ENST00000421052 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
RAD18-205ENST00000421052 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
RAD18-205ENST00000421052 CUL7Q14999 1698 aa26.73■■□□□ 1.87
RAD18-205ENST00000421052 NUP160Q12769 1436 aa26.69■■□□□ 1.86
RAD18-205ENST00000421052 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
RAD18-205ENST00000421052 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
RAD18-205ENST00000421052 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
RAD18-205ENST00000421052 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms