Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SNCAP37840 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 AC005562.1-201ENST00000583030 3219 ntBASIC12.56□□□□□ -0.4
SNCAP37840 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.56□□□□□ -0.4
SNCAP37840 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SNCAP37840 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SNCAP37840 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SNCAP37840 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 MTHFR-210ENST00000641407 2387 ntBASIC12.55□□□□□ -0.4
SNCAP37840 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 MIR346-201ENST00000362234 95 ntBASIC12.55□□□□□ -0.4
SNCAP37840 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.55□□□□□ -0.4
SNCAP37840 ACTG1P14-201ENST00000446382 1122 ntBASIC12.55□□□□□ -0.4
SNCAP37840 TIMM8BP1-201ENST00000452384 211 ntBASIC12.55□□□□□ -0.4
SNCAP37840 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
SNCAP37840 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.55□□□□□ -0.4
SNCAP37840 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.55□□□□□ -0.4
SNCAP37840 AC106730.1-201ENST00000566722 1090 ntBASIC12.55□□□□□ -0.4
SNCAP37840 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.55□□□□□ -0.4
SNCAP37840 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SNCAP37840 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SNCAP37840 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.55□□□□□ -0.4
SNCAP37840 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SNCAP37840 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 AC105206.1-202ENST00000314927 2368 ntBASIC12.55□□□□□ -0.4
SNCAP37840 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SNCAP37840 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
SNCAP37840 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
SNCAP37840 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SNCAP37840 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SNCAP37840 AC023274.1-201ENST00000418278 595 ntBASIC12.54□□□□□ -0.4
SNCAP37840 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.54□□□□□ -0.4
SNCAP37840 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.54□□□□□ -0.4
SNCAP37840 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms