RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
PAF1-201ENST00000221265 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
PAF1-201ENST00000221265 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
PAF1-201ENST00000221265 ABCC9O60706 1549 aa28.61■■■□□ 2.17
PAF1-201ENST00000221265 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
PAF1-201ENST00000221265 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
PAF1-201ENST00000221265 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
PAF1-201ENST00000221265 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
PAF1-201ENST00000221265 NACADO15069 1562 aa28■■■□□ 2.07
PAF1-201ENST00000221265 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
PAF1-201ENST00000221265 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
PAF1-201ENST00000221265 UNC13AQ9UPW8 1703 aa27.39■■□□□ 1.97
PAF1-201ENST00000221265 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
PAF1-201ENST00000221265 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
PAF1-201ENST00000221265 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
PAF1-201ENST00000221265 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
PAF1-201ENST00000221265 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
PAF1-201ENST00000221265 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
PAF1-201ENST00000221265 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
PAF1-201ENST00000221265 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
PAF1-201ENST00000221265 WIZO95785 1651 aa26.49■■□□□ 1.83
PAF1-201ENST00000221265 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
PAF1-201ENST00000221265 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
PAF1-201ENST00000221265 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
PAF1-201ENST00000221265 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
PAF1-201ENST00000221265 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
PAF1-201ENST00000221265 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
PAF1-201ENST00000221265 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.74
PAF1-201ENST00000221265 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
PAF1-201ENST00000221265 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
PAF1-201ENST00000221265 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
PAF1-201ENST00000221265 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
PAF1-201ENST00000221265 ABCC8Q09428 1581 aa25.38■■□□□ 1.65
PAF1-201ENST00000221265 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
PAF1-201ENST00000221265 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PAF1-201ENST00000221265 CFTRP13569 1480 aa25.28■■□□□ 1.64
PAF1-201ENST00000221265 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
PAF1-201ENST00000221265 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
PAF1-201ENST00000221265 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
PAF1-201ENST00000221265 NESP48681 1621 aa25.12■■□□□ 1.61
PAF1-201ENST00000221265 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
PAF1-201ENST00000221265 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
PAF1-201ENST00000221265 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
PAF1-201ENST00000221265 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
PAF1-201ENST00000221265 TOP2BQ02880 1626 aa24.95■■□□□ 1.59
PAF1-201ENST00000221265 CUX1P39880 1505 aa24.95■■□□□ 1.58
PAF1-201ENST00000221265 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
PAF1-201ENST00000221265 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.57
PAF1-201ENST00000221265 SOGA1O94964 1423 aa24.87■■□□□ 1.57
PAF1-201ENST00000221265 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
PAF1-201ENST00000221265 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
PAF1-201ENST00000221265 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
PAF1-201ENST00000221265 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
PAF1-201ENST00000221265 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
PAF1-201ENST00000221265 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
PAF1-201ENST00000221265 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
PAF1-201ENST00000221265 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
PAF1-201ENST00000221265 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
PAF1-201ENST00000221265 EEA1Q15075 1411 aa24.64■■□□□ 1.53
PAF1-201ENST00000221265 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
PAF1-201ENST00000221265 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
PAF1-201ENST00000221265 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
PAF1-201ENST00000221265 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
PAF1-201ENST00000221265 CUX2O14529 1486 aa24.49■■□□□ 1.51
PAF1-201ENST00000221265 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
PAF1-201ENST00000221265 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
PAF1-201ENST00000221265 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
PAF1-201ENST00000221265 KIF21BO75037 1637 aa24.4■■□□□ 1.5
PAF1-201ENST00000221265 WDR62O43379 1518 aa24.39■■□□□ 1.5
PAF1-201ENST00000221265 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
PAF1-201ENST00000221265 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
PAF1-201ENST00000221265 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
PAF1-201ENST00000221265 RAPGEF2Q9Y4G8 1499 aa24.35■■□□□ 1.49
PAF1-201ENST00000221265 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
PAF1-201ENST00000221265 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
PAF1-201ENST00000221265 IGF1RP08069 1367 aa24.32■■□□□ 1.48
PAF1-201ENST00000221265 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
PAF1-201ENST00000221265 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
PAF1-201ENST00000221265 TNIKQ9UKE5 1360 aa24.27■■□□□ 1.48
PAF1-201ENST00000221265 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
PAF1-201ENST00000221265 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
PAF1-201ENST00000221265 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
PAF1-201ENST00000221265 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
PAF1-201ENST00000221265 CARMIL1Q5VZK9 1371 aa24.18■■□□□ 1.46
PAF1-201ENST00000221265 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
PAF1-201ENST00000221265 ZNF608Q9ULD9 1512 aaPredicted RBP24.16■■□□□ 1.46
PAF1-201ENST00000221265 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.462e-8■■■■■ 39.4
PAF1-201ENST00000221265 CUL7Q14999 1698 aa24.1■■□□□ 1.45
PAF1-201ENST00000221265 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
PAF1-201ENST00000221265 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
PAF1-201ENST00000221265 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
PAF1-201ENST00000221265 PCGF6Q9BYE7 350 aa24.03■■□□□ 1.44
PAF1-201ENST00000221265 CLIP1P30622 1438 aa24■■□□□ 1.43
PAF1-201ENST00000221265 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
PAF1-201ENST00000221265 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
PAF1-201ENST00000221265 HRCP23327 699 aa23.91■■□□□ 1.42
PAF1-201ENST00000221265 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
PAF1-201ENST00000221265 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
PAF1-201ENST00000221265 CTTNBP2Q8WZ74 1663 aa23.88■■□□□ 1.41
PAF1-201ENST00000221265 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms