Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 RPL37AP1-201ENST00000412502 279 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC140878.1-201ENST00000565277 250 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 GPALPP1-207ENST00000611650 899 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 SPDYE12P-201ENST00000618416 771 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC136759.1-202ENST00000530858 2194 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AC018529.2-202ENST00000611482 3087 ntBASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTN4IP1Q8WWV3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AL138828.2-201ENST00000615812 383 ntBASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AC073592.8-201ENST00000624126 511 ntBASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.84□□□□□ -0.35
RTN4IP1Q8WWV3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms