RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
NDFIP2-205ENST00000612570 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.67
NDFIP2-205ENST00000612570 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
NDFIP2-205ENST00000612570 SHROOM4Q9ULL8 1493 aa24.5■■□□□ 1.51
NDFIP2-205ENST00000612570 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
NDFIP2-205ENST00000612570 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
NDFIP2-205ENST00000612570 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
NDFIP2-205ENST00000612570 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
NDFIP2-205ENST00000612570 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
NDFIP2-205ENST00000612570 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
NDFIP2-205ENST00000612570 ABCC9O60706 1549 aa22.38■■□□□ 1.17
NDFIP2-205ENST00000612570 APLP2Q06481 763 aa22.38■■□□□ 1.17
NDFIP2-205ENST00000612570 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
NDFIP2-205ENST00000612570 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
NDFIP2-205ENST00000612570 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
NDFIP2-205ENST00000612570 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
NDFIP2-205ENST00000612570 PELP1Q8IZL8 1130 aaKnown RBP22.12■■□□□ 1.13
NDFIP2-205ENST00000612570 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
NDFIP2-205ENST00000612570 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
NDFIP2-205ENST00000612570 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
NDFIP2-205ENST00000612570 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
NDFIP2-205ENST00000612570 TRIM26Q12899 539 aaPredicted RBP21.95■■□□□ 1.1
NDFIP2-205ENST00000612570 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
NDFIP2-205ENST00000612570 HRCP23327 699 aa21.8■■□□□ 1.08
NDFIP2-205ENST00000612570 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
NDFIP2-205ENST00000612570 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
NDFIP2-205ENST00000612570 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
NDFIP2-205ENST00000612570 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
NDFIP2-205ENST00000612570 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
NDFIP2-205ENST00000612570 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
NDFIP2-205ENST00000612570 ITGAEP38570 1179 aa21.31■■□□□ 1
NDFIP2-205ENST00000612570 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
NDFIP2-205ENST00000612570 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
NDFIP2-205ENST00000612570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
NDFIP2-205ENST00000612570 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
NDFIP2-205ENST00000612570 NEFLP07196 543 aa21.2■□□□□ 0.98
NDFIP2-205ENST00000612570 NACADO15069 1562 aa21.18■□□□□ 0.98
NDFIP2-205ENST00000612570 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
NDFIP2-205ENST00000612570 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
NDFIP2-205ENST00000612570 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.96
NDFIP2-205ENST00000612570 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
NDFIP2-205ENST00000612570 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
NDFIP2-205ENST00000612570 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
NDFIP2-205ENST00000612570 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
NDFIP2-205ENST00000612570 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
NDFIP2-205ENST00000612570 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
NDFIP2-205ENST00000612570 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
NDFIP2-205ENST00000612570 MYT1Q01538 1121 aa20.68■□□□□ 0.9
NDFIP2-205ENST00000612570 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
NDFIP2-205ENST00000612570 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
NDFIP2-205ENST00000612570 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
NDFIP2-205ENST00000612570 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
NDFIP2-205ENST00000612570 EEA1Q15075 1411 aa20.61■□□□□ 0.89
NDFIP2-205ENST00000612570 FBLN2P98095 1184 aa20.61■□□□□ 0.89
NDFIP2-205ENST00000612570 ZNF316A6NFI3 1004 aaPredicted RBP20.57■□□□□ 0.88
NDFIP2-205ENST00000612570 TRIM52Q96A61 297 aa20.56■□□□□ 0.88
NDFIP2-205ENST00000612570 CLIP1P30622 1438 aa20.56■□□□□ 0.88
NDFIP2-205ENST00000612570 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
NDFIP2-205ENST00000612570 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
NDFIP2-205ENST00000612570 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
NDFIP2-205ENST00000612570 BCANQ96GW7 911 aa20.5■□□□□ 0.87
NDFIP2-205ENST00000612570 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
NDFIP2-205ENST00000612570 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
NDFIP2-205ENST00000612570 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
NDFIP2-205ENST00000612570 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
NDFIP2-205ENST00000612570 SOGA1O94964 1423 aa20.43■□□□□ 0.86
NDFIP2-205ENST00000612570 WIZO95785 1651 aa20.41■□□□□ 0.86
NDFIP2-205ENST00000612570 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
NDFIP2-205ENST00000612570 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
NDFIP2-205ENST00000612570 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
NDFIP2-205ENST00000612570 KIF27Q86VH2 1401 aa20.33■□□□□ 0.85
NDFIP2-205ENST00000612570 TOP2AP11388 1531 aaKnown RBP20.28■□□□□ 0.84
NDFIP2-205ENST00000612570 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
NDFIP2-205ENST00000612570 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
NDFIP2-205ENST00000612570 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
NDFIP2-205ENST00000612570 ZNF777Q9ULD5 760 aaPredicted RBP20.23■□□□□ 0.83
NDFIP2-205ENST00000612570 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
NDFIP2-205ENST00000612570 ANP32CO43423 234 aa20.19■□□□□ 0.82
NDFIP2-205ENST00000612570 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
NDFIP2-205ENST00000612570 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
NDFIP2-205ENST00000612570 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
NDFIP2-205ENST00000612570 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.82
NDFIP2-205ENST00000612570 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
NDFIP2-205ENST00000612570 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
NDFIP2-205ENST00000612570 TONSLQ96HA7 1378 aa20.1■□□□□ 0.81
NDFIP2-205ENST00000612570 CUX2O14529 1486 aa20.08■□□□□ 0.81
NDFIP2-205ENST00000612570 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
NDFIP2-205ENST00000612570 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
NDFIP2-205ENST00000612570 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
NDFIP2-205ENST00000612570 DDX10Q13206 875 aaKnown RBP20.01■□□□□ 0.79
NDFIP2-205ENST00000612570 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
NDFIP2-205ENST00000612570 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
NDFIP2-205ENST00000612570 MIER1Q8N108 512 aa19.96■□□□□ 0.79
NDFIP2-205ENST00000612570 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
NDFIP2-205ENST00000612570 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
NDFIP2-205ENST00000612570 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
NDFIP2-205ENST00000612570 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
NDFIP2-205ENST00000612570 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
NDFIP2-205ENST00000612570 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
NDFIP2-205ENST00000612570 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms