Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AL121723.1-201ENST00000445194 1519 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC139749.1-202ENST00000617529 3139 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 RPL13P2-201ENST00000440687 659 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 FAM86GP-201ENST00000448322 971 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AC010336.2-201ENST00000564226 506 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AC011467.4-201ENST00000594891 528 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AC012508.2-201ENST00000567613 1472 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 SNX18-202ENST00000343017 3140 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 REXO1L2P-201ENST00000425429 2069 ntBASIC13.71□□□□□ -0.21
HLA-DQA2P01906 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HLA-DQA2P01906 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA2P01906 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 AL359258.3-201ENST00000622910 2331 ntBASIC13.7□□□□□ -0.22
HLA-DQA2P01906 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA2P01906 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms