Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AC055811.4-201ENST00000624039 1754 ntBASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV18A0A075B6X5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 FO393414.2-201ENST00000405153 598 ntBASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 TARDBPP1-201ENST00000442013 1203 ntBASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 RN7SL589P-201ENST00000481268 310 ntBASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AC104109.2-201ENST00000602919 1418 ntBASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRAV18A0A075B6X5 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 SPCS2P4-201ENST00000436160 681 ntBASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 TPT1P11-201ENST00000458482 498 ntBASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 AC243562.1-201ENST00000560672 389 ntBASIC13.1□□□□□ -0.31
TRAV18A0A075B6X5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms