Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 SLC25A39P2-201ENST00000537614 270 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AP000842.3-202ENST00000569238 1080 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC024267.1-201ENST00000582320 895 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC073389.1-201ENST00000595595 795 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 FOXO1B-201ENST00000504678 1527 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 AC027612.1-201ENST00000445234 2395 ntBASIC12.92□□□□□ -0.34
CLCC1Q96S66 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCC1Q96S66 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCC1Q96S66 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 RPSAP43-201ENST00000402237 625 ntBASIC12.91□□□□□ -0.34
CLCC1Q96S66 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC069335.1-201ENST00000489972 472 ntBASIC12.91□□□□□ -0.34
CLCC1Q96S66 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC105339.1-204ENST00000636249 355 ntBASIC12.91□□□□□ -0.34
CLCC1Q96S66 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCC1Q96S66 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLCC1Q96S66 AC134407.2-201ENST00000625089 1978 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 Z82170.1-201ENST00000625081 3192 ntBASIC12.9□□□□□ -0.34
CLCC1Q96S66 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CLCC1Q96S66 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CLCC1Q96S66 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms