RNA–Protein interactions for RNA: ENST00000584778.5

RBFOX3-212, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RBFOX3, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-212ENST00000584778 NISCHQ9Y2I1 1504 aa37.98■■■■□ 3.67
RBFOX3-212ENST00000584778 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
RBFOX3-212ENST00000584778 ABCC9O60706 1549 aa32.59■■■□□ 2.81
RBFOX3-212ENST00000584778 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
RBFOX3-212ENST00000584778 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
RBFOX3-212ENST00000584778 NACADO15069 1562 aa31.5■■■□□ 2.63
RBFOX3-212ENST00000584778 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
RBFOX3-212ENST00000584778 DCAF1Q9Y4B6 1507 aa31.4■■■□□ 2.62
RBFOX3-212ENST00000584778 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
RBFOX3-212ENST00000584778 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
RBFOX3-212ENST00000584778 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.51
RBFOX3-212ENST00000584778 PABPN1Q86U42 306 aaKnown RBP eCLIP30.57■■■□□ 2.48
RBFOX3-212ENST00000584778 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
RBFOX3-212ENST00000584778 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
RBFOX3-212ENST00000584778 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
RBFOX3-212ENST00000584778 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
RBFOX3-212ENST00000584778 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
RBFOX3-212ENST00000584778 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
RBFOX3-212ENST00000584778 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
RBFOX3-212ENST00000584778 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
RBFOX3-212ENST00000584778 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
RBFOX3-212ENST00000584778 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
RBFOX3-212ENST00000584778 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
RBFOX3-212ENST00000584778 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
RBFOX3-212ENST00000584778 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
RBFOX3-212ENST00000584778 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
RBFOX3-212ENST00000584778 WIZO95785 1651 aa28.99■■■□□ 2.23
RBFOX3-212ENST00000584778 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
RBFOX3-212ENST00000584778 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
RBFOX3-212ENST00000584778 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
RBFOX3-212ENST00000584778 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
RBFOX3-212ENST00000584778 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.13
RBFOX3-212ENST00000584778 NESP48681 1621 aa28.29■■■□□ 2.12
RBFOX3-212ENST00000584778 CADPSQ9ULU8 1353 aa28.28■■■□□ 2.12
RBFOX3-212ENST00000584778 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
RBFOX3-212ENST00000584778 CFTRP13569 1480 aa28.16■■■□□ 2.1
RBFOX3-212ENST00000584778 PDS5BQ9NTI5 1447 aa28.08■■■□□ 2.09
RBFOX3-212ENST00000584778 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
RBFOX3-212ENST00000584778 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
RBFOX3-212ENST00000584778 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
RBFOX3-212ENST00000584778 PRDM2Q13029 1718 aa27.9■■■□□ 2.06
RBFOX3-212ENST00000584778 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
RBFOX3-212ENST00000584778 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
RBFOX3-212ENST00000584778 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
RBFOX3-212ENST00000584778 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
RBFOX3-212ENST00000584778 WDR62O43379 1518 aa27.62■■■□□ 2.01
RBFOX3-212ENST00000584778 CUX2O14529 1486 aa27.59■■■□□ 2.01
RBFOX3-212ENST00000584778 ABCC8Q09428 1581 aa27.54■■■□□ 2
RBFOX3-212ENST00000584778 TOPBP1Q92547 1522 aa27.53■■■□□ 2
RBFOX3-212ENST00000584778 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
RBFOX3-212ENST00000584778 CUX1P39880 1505 aa27.45■■□□□ 1.98
RBFOX3-212ENST00000584778 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
RBFOX3-212ENST00000584778 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
RBFOX3-212ENST00000584778 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
RBFOX3-212ENST00000584778 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
RBFOX3-212ENST00000584778 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
RBFOX3-212ENST00000584778 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
RBFOX3-212ENST00000584778 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
RBFOX3-212ENST00000584778 SOGA1O94964 1423 aa27.25■■□□□ 1.95
RBFOX3-212ENST00000584778 RAD54L2Q9Y4B4 1467 aa27.23■■□□□ 1.95
RBFOX3-212ENST00000584778 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
RBFOX3-212ENST00000584778 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
RBFOX3-212ENST00000584778 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
RBFOX3-212ENST00000584778 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
RBFOX3-212ENST00000584778 TDRD9Q8NDG6 1382 aaKnown RBP27.06■■□□□ 1.92
RBFOX3-212ENST00000584778 ABCA10Q8WWZ4 1543 aa27.05■■□□□ 1.92
RBFOX3-212ENST00000584778 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.92
RBFOX3-212ENST00000584778 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
RBFOX3-212ENST00000584778 EIF4G3O43432 1585 aaKnown RBP26.99■■□□□ 1.91
RBFOX3-212ENST00000584778 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
RBFOX3-212ENST00000584778 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
RBFOX3-212ENST00000584778 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
RBFOX3-212ENST00000584778 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
RBFOX3-212ENST00000584778 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
RBFOX3-212ENST00000584778 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
RBFOX3-212ENST00000584778 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
RBFOX3-212ENST00000584778 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
RBFOX3-212ENST00000584778 RUSC2Q8N2Y8 1516 aa26.72■■□□□ 1.87
RBFOX3-212ENST00000584778 FBLN2P98095 1184 aa26.71■■□□□ 1.87
RBFOX3-212ENST00000584778 IGF1RP08069 1367 aa26.69■■□□□ 1.86
RBFOX3-212ENST00000584778 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
RBFOX3-212ENST00000584778 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
RBFOX3-212ENST00000584778 FHAD1B1AJZ9 1412 aa26.62■■□□□ 1.85
RBFOX3-212ENST00000584778 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
RBFOX3-212ENST00000584778 OSCARQ8IYS5 282 aa26.6■■□□□ 1.85
RBFOX3-212ENST00000584778 CHD1O14646 1710 aa26.58■■□□□ 1.85
RBFOX3-212ENST00000584778 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
RBFOX3-212ENST00000584778 CARMIL1Q5VZK9 1371 aa26.55■■□□□ 1.84
RBFOX3-212ENST00000584778 EEA1Q15075 1411 aa26.55■■□□□ 1.84
RBFOX3-212ENST00000584778 CUL7Q14999 1698 aa26.54■■□□□ 1.84
RBFOX3-212ENST00000584778 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
RBFOX3-212ENST00000584778 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
RBFOX3-212ENST00000584778 RAPGEF2Q9Y4G8 1499 aa26.41■■□□□ 1.82
RBFOX3-212ENST00000584778 PRXQ9BXM0 1461 aa26.39■■□□□ 1.81
RBFOX3-212ENST00000584778 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
RBFOX3-212ENST00000584778 NUP160Q12769 1436 aa26.37■■□□□ 1.81
RBFOX3-212ENST00000584778 CEP170Q5SW79 1584 aa26.35■■□□□ 1.81
RBFOX3-212ENST00000584778 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
RBFOX3-212ENST00000584778 KIAA0586Q9BVV6 1533 aa26.22■■□□□ 1.79
RBFOX3-212ENST00000584778 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms