RNA–Protein interactions for RNA: ENST00000569238.1

AP000842.3-202, humanhuman

BASIC

Gene AP000842.3, Length 1,080 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-202ENST00000569238 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
AP000842.3-202ENST00000569238 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
AP000842.3-202ENST00000569238 ABCC9O60706 1549 aa34.58■■■■□ 3.13
AP000842.3-202ENST00000569238 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
AP000842.3-202ENST00000569238 NACADO15069 1562 aa33.29■■■□□ 2.92
AP000842.3-202ENST00000569238 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
AP000842.3-202ENST00000569238 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
AP000842.3-202ENST00000569238 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
AP000842.3-202ENST00000569238 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
AP000842.3-202ENST00000569238 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
AP000842.3-202ENST00000569238 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
AP000842.3-202ENST00000569238 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
AP000842.3-202ENST00000569238 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
AP000842.3-202ENST00000569238 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
AP000842.3-202ENST00000569238 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
AP000842.3-202ENST00000569238 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
AP000842.3-202ENST00000569238 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
AP000842.3-202ENST00000569238 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
AP000842.3-202ENST00000569238 SMARCA4P51532 1647 aa30.94■■■□□ 2.54
AP000842.3-202ENST00000569238 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
AP000842.3-202ENST00000569238 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
AP000842.3-202ENST00000569238 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
AP000842.3-202ENST00000569238 NCAPD3P42695 1498 aa30.72■■■□□ 2.51
AP000842.3-202ENST00000569238 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
AP000842.3-202ENST00000569238 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
AP000842.3-202ENST00000569238 HMGXB3Q12766 1538 aa30.57■■■□□ 2.49
AP000842.3-202ENST00000569238 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
AP000842.3-202ENST00000569238 RSF1Q96T23 1441 aaPredicted RBP30.43■■■□□ 2.46
AP000842.3-202ENST00000569238 WIZO95785 1651 aa30.42■■■□□ 2.46
AP000842.3-202ENST00000569238 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
AP000842.3-202ENST00000569238 NESP48681 1621 aa29.96■■■□□ 2.39
AP000842.3-202ENST00000569238 LAMC3Q9Y6N6 1575 aa29.89■■■□□ 2.38
AP000842.3-202ENST00000569238 CADPSQ9ULU8 1353 aa29.82■■■□□ 2.36
AP000842.3-202ENST00000569238 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
AP000842.3-202ENST00000569238 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
AP000842.3-202ENST00000569238 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
AP000842.3-202ENST00000569238 PDS5BQ9NTI5 1447 aa29.68■■■□□ 2.34
AP000842.3-202ENST00000569238 CFTRP13569 1480 aa29.68■■■□□ 2.34
AP000842.3-202ENST00000569238 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
AP000842.3-202ENST00000569238 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
AP000842.3-202ENST00000569238 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
AP000842.3-202ENST00000569238 CUX2O14529 1486 aa29.46■■■□□ 2.31
AP000842.3-202ENST00000569238 PRDM2Q13029 1718 aa29.45■■■□□ 2.3
AP000842.3-202ENST00000569238 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
AP000842.3-202ENST00000569238 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
AP000842.3-202ENST00000569238 WDR62O43379 1518 aa29.29■■■□□ 2.28
AP000842.3-202ENST00000569238 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.26
AP000842.3-202ENST00000569238 TOPBP1Q92547 1522 aa29.03■■■□□ 2.24
AP000842.3-202ENST00000569238 ABCC8Q09428 1581 aa29.01■■■□□ 2.24
AP000842.3-202ENST00000569238 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
AP000842.3-202ENST00000569238 CUX1P39880 1505 aa28.84■■■□□ 2.21
AP000842.3-202ENST00000569238 IFT140Q96RY7 1462 aa28.82■■■□□ 2.2
AP000842.3-202ENST00000569238 POLA1P09884 1462 aaPredicted RBP28.79■■■□□ 2.2
AP000842.3-202ENST00000569238 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
AP000842.3-202ENST00000569238 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
AP000842.3-202ENST00000569238 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
AP000842.3-202ENST00000569238 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
AP000842.3-202ENST00000569238 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
AP000842.3-202ENST00000569238 SOGA1O94964 1423 aa28.66■■■□□ 2.18
AP000842.3-202ENST00000569238 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
AP000842.3-202ENST00000569238 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
AP000842.3-202ENST00000569238 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
AP000842.3-202ENST00000569238 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
AP000842.3-202ENST00000569238 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
AP000842.3-202ENST00000569238 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
AP000842.3-202ENST00000569238 TDRD9Q8NDG6 1382 aaKnown RBP28.49■■■□□ 2.15
AP000842.3-202ENST00000569238 DNAJC5Q9H3Z4 198 aa28.46■■■□□ 2.15
AP000842.3-202ENST00000569238 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
AP000842.3-202ENST00000569238 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
AP000842.3-202ENST00000569238 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
AP000842.3-202ENST00000569238 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
AP000842.3-202ENST00000569238 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
AP000842.3-202ENST00000569238 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
AP000842.3-202ENST00000569238 MAGI1Q96QZ7 1491 aaPredicted RBP28.24■■■□□ 2.11
AP000842.3-202ENST00000569238 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
AP000842.3-202ENST00000569238 CHD1O14646 1710 aa28.2■■■□□ 2.1
AP000842.3-202ENST00000569238 FBLN2P98095 1184 aa28.15■■■□□ 2.1
AP000842.3-202ENST00000569238 SYNJ2O15056 1496 aa28.13■■■□□ 2.09
AP000842.3-202ENST00000569238 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
AP000842.3-202ENST00000569238 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
AP000842.3-202ENST00000569238 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
AP000842.3-202ENST00000569238 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
AP000842.3-202ENST00000569238 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
AP000842.3-202ENST00000569238 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.08
AP000842.3-202ENST00000569238 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
AP000842.3-202ENST00000569238 IGF1RP08069 1367 aa27.96■■■□□ 2.07
AP000842.3-202ENST00000569238 CLASP1Q7Z460 1538 aa27.91■■■□□ 2.06
AP000842.3-202ENST00000569238 CUL7Q14999 1698 aa27.87■■■□□ 2.05
AP000842.3-202ENST00000569238 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
AP000842.3-202ENST00000569238 NUP160Q12769 1436 aa27.84■■■□□ 2.05
AP000842.3-202ENST00000569238 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
AP000842.3-202ENST00000569238 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
AP000842.3-202ENST00000569238 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
AP000842.3-202ENST00000569238 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
AP000842.3-202ENST00000569238 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
AP000842.3-202ENST00000569238 CARMIL1Q5VZK9 1371 aa27.78■■■□□ 2.04
AP000842.3-202ENST00000569238 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
AP000842.3-202ENST00000569238 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
AP000842.3-202ENST00000569238 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
AP000842.3-202ENST00000569238 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms