RNA–Protein interactions for RNA: ENST00000366978.5

NSL1-203, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

TSL 2 BASIC

Gene NSL1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-203ENST00000366978 NISCHQ9Y2I1 1504 aa40.9■■■■■ 4.14
NSL1-203ENST00000366978 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
NSL1-203ENST00000366978 ABCC9O60706 1549 aa36.19■■■■□ 3.38
NSL1-203ENST00000366978 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
NSL1-203ENST00000366978 NACADO15069 1562 aa34.52■■■■□ 3.12
NSL1-203ENST00000366978 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
NSL1-203ENST00000366978 MYO15BQ96JP2 1530 aa34.18■■■■□ 3.06
NSL1-203ENST00000366978 ZCCHC6Q5VYS8 1495 aaKnown RBP33.98■■■■□ 3.03
NSL1-203ENST00000366978 DCAF1Q9Y4B6 1507 aa33.86■■■■□ 3.01
NSL1-203ENST00000366978 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
NSL1-203ENST00000366978 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
NSL1-203ENST00000366978 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
NSL1-203ENST00000366978 BICRAQ9NZM4 1560 aa33.57■■■□□ 2.97
NSL1-203ENST00000366978 SCRIBQ14160 1630 aa33.3■■■□□ 2.92
NSL1-203ENST00000366978 SHROOM4Q9ULL8 1493 aa33.29■■■□□ 2.92
NSL1-203ENST00000366978 EIF4G1Q04637 1599 aaKnown RBP32.76■■■□□ 2.83
NSL1-203ENST00000366978 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
NSL1-203ENST00000366978 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
NSL1-203ENST00000366978 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
NSL1-203ENST00000366978 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
NSL1-203ENST00000366978 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
NSL1-203ENST00000366978 BAZ1AQ9NRL2 1556 aaPredicted RBP31.76■■■□□ 2.67
NSL1-203ENST00000366978 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
NSL1-203ENST00000366978 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
NSL1-203ENST00000366978 PEG3Q9GZU2 1588 aa31.55■■■□□ 2.64
NSL1-203ENST00000366978 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
NSL1-203ENST00000366978 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
NSL1-203ENST00000366978 ERCC6Q03468 1493 aa31.27■■■□□ 2.6
NSL1-203ENST00000366978 NESP48681 1621 aa31.17■■■□□ 2.58
NSL1-203ENST00000366978 CUX2O14529 1486 aa31.12■■■□□ 2.57
NSL1-203ENST00000366978 WIZO95785 1651 aa31.12■■■□□ 2.57
NSL1-203ENST00000366978 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
NSL1-203ENST00000366978 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
NSL1-203ENST00000366978 PDS5BQ9NTI5 1447 aa30.91■■■□□ 2.54
NSL1-203ENST00000366978 CADPSQ9ULU8 1353 aa30.9■■■□□ 2.54
NSL1-203ENST00000366978 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
NSL1-203ENST00000366978 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
NSL1-203ENST00000366978 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
NSL1-203ENST00000366978 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
NSL1-203ENST00000366978 CFTRP13569 1480 aa30.62■■■□□ 2.49
NSL1-203ENST00000366978 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
NSL1-203ENST00000366978 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
NSL1-203ENST00000366978 FANCD2Q9BXW9 1451 aa30.53■■■□□ 2.48
NSL1-203ENST00000366978 WDR62O43379 1518 aa30.51■■■□□ 2.47
NSL1-203ENST00000366978 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
NSL1-203ENST00000366978 PRDM2Q13029 1718 aa30.31■■■□□ 2.44
NSL1-203ENST00000366978 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
NSL1-203ENST00000366978 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
NSL1-203ENST00000366978 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
NSL1-203ENST00000366978 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
NSL1-203ENST00000366978 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
NSL1-203ENST00000366978 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
NSL1-203ENST00000366978 ZNF608Q9ULD9 1512 aaPredicted RBP29.78■■■□□ 2.36
NSL1-203ENST00000366978 OSCARQ8IYS5 282 aa29.74■■■□□ 2.35
NSL1-203ENST00000366978 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.35
NSL1-203ENST00000366978 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
NSL1-203ENST00000366978 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
NSL1-203ENST00000366978 SOGA1O94964 1423 aa29.57■■■□□ 2.32
NSL1-203ENST00000366978 CUX1P39880 1505 aa29.57■■■□□ 2.32
NSL1-203ENST00000366978 AQRO60306 1485 aaKnown RBP eCLIP29.57■■■□□ 2.321e-7■■■□□ 16.7
NSL1-203ENST00000366978 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
NSL1-203ENST00000366978 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
NSL1-203ENST00000366978 WDR97A6NE52 1622 aa29.48■■■□□ 2.31
NSL1-203ENST00000366978 TDRD9Q8NDG6 1382 aaKnown RBP29.45■■■□□ 2.3
NSL1-203ENST00000366978 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
NSL1-203ENST00000366978 CHD1O14646 1710 aa29.35■■■□□ 2.29
NSL1-203ENST00000366978 FBLN2P98095 1184 aa29.32■■■□□ 2.28
NSL1-203ENST00000366978 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
NSL1-203ENST00000366978 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
NSL1-203ENST00000366978 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
NSL1-203ENST00000366978 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
NSL1-203ENST00000366978 RIMBP3CA6NJZ7 1639 aa29.26■■■□□ 2.28
NSL1-203ENST00000366978 RIMBP3BA6NNM3 1639 aa29.26■■■□□ 2.28
NSL1-203ENST00000366978 RIMBP3Q9UFD9 1639 aa29.26■■■□□ 2.28
NSL1-203ENST00000366978 WRNQ14191 1432 aaPredicted RBP eCLIP29.25■■■□□ 2.27
NSL1-203ENST00000366978 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
NSL1-203ENST00000366978 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
NSL1-203ENST00000366978 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
NSL1-203ENST00000366978 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
NSL1-203ENST00000366978 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
NSL1-203ENST00000366978 ABCA5Q8WWZ7 1642 aa29.17■■■□□ 2.26
NSL1-203ENST00000366978 SYNJ2O15056 1496 aa29.16■■■□□ 2.26
NSL1-203ENST00000366978 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
NSL1-203ENST00000366978 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
NSL1-203ENST00000366978 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
NSL1-203ENST00000366978 CYB5RLQ6IPT4 315 aa28.98■■■□□ 2.23
NSL1-203ENST00000366978 ARAP1Q96P48 1450 aa28.95■■■□□ 2.23
NSL1-203ENST00000366978 ADAMTS12P58397 1594 aa28.93■■■□□ 2.22
NSL1-203ENST00000366978 ERICH3Q5RHP9 1530 aa28.92■■■□□ 2.22
NSL1-203ENST00000366978 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
NSL1-203ENST00000366978 FHAD1B1AJZ9 1412 aa28.89■■■□□ 2.22
NSL1-203ENST00000366978 NUP160Q12769 1436 aa28.81■■■□□ 2.2
NSL1-203ENST00000366978 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
NSL1-203ENST00000366978 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
NSL1-203ENST00000366978 SHROOM2Q13796 1616 aa28.62■■■□□ 2.17
NSL1-203ENST00000366978 IGF1RP08069 1367 aa28.6■■■□□ 2.17
NSL1-203ENST00000366978 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
NSL1-203ENST00000366978 TRHP20396 242 aaPredicted RBP28.57■■■□□ 2.16
NSL1-203ENST00000366978 CUL7Q14999 1698 aa28.57■■■□□ 2.16
NSL1-203ENST00000366978 RUSC2Q8N2Y8 1516 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms